Pairwise Alignments

Query, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 15/249 (6%)

Query: 36  SDQLLQLLVGLENLLRLLPWWLLLLLVGLLAWHASRSLLRSAVLVALLALIGMLGLWDKL 95
           S  L +  +GL   L LL  W     +GL+   A      S+++    AL+    LW  L
Sbjct: 5   SGLLGERFIGLLTPLALLGLWEAAARMGLV--DARFFPPPSSIVHTFGALVASGELWTNL 62

Query: 96  LQTLALVLVSTGLCVLVGVP---LGILLAARPLARRLLLPVLDVMQTLPAFVYLIPVLML 152
           L +L  + +     +L GVP   LG+ +      R  + P++     +P    L  VL++
Sbjct: 63  LASLRRLFLGM---LLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLI 119

Query: 153 FGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALP 212
           FGLG++  V    + A  P++  T +G++ ID   L   H   ASRWQ  R IALP ALP
Sbjct: 120 FGLGEMSKVVMVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALP 179

Query: 213 SIMAGLNQSVMMALSMVVVASMIGAR-GLGEDVLAGIQTLNVGQGMEAGLAIVAL----- 266
           SIMAG+  ++ M L ++ ++ M+ A  G+G  +    Q L V   M  GL ++AL     
Sbjct: 180 SIMAGVKLAMGMGLILIAISEMVAASDGIGYMIWNAWQVLTV-DTMYVGLLVIALLGFVF 238

Query: 267 AMVIDRISQ 275
           ++++D I +
Sbjct: 239 SVILDEIER 247