Pairwise Alignments

Query, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

Subject, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score =  251 bits (642), Expect = 1e-71
 Identities = 131/266 (49%), Positives = 186/266 (69%), Gaps = 1/266 (0%)

Query: 17  INRLVDWLVLNYGDHLRSLSDQLLQLLVGLENLLRLLPWWLLLLLVGLLAWHASRSLLRS 76
           IN+ + W+V ++    +++   +   L  +++LL  LP   ++ L+GL AW  +   L  
Sbjct: 86  INQGLGWVVEHFRPFFQTVRLPIDSTLNSVQSLLTGLPTLAMIALIGLFAWQFAGRALAI 145

Query: 77  AVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDV 136
              VALL L+ MLG+W + + TL+LVL S   C+++G+PLG+LLA+   A+R++ PVLD 
Sbjct: 146 GTTVALL-LVAMLGIWPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSDRAQRIMRPVLDA 204

Query: 137 MQTLPAFVYLIPVLMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGA 196
           MQT PAFVYL+PV+MLFG+G VP V  T+I+AL PLVRLT LGL Q+ P L++AA   GA
Sbjct: 205 MQTTPAFVYLVPVVMLFGIGNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGA 264

Query: 197 SRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNVGQG 256
           S WQ L ++ LPLA+PSIMAG+NQ++M++LSMVV+ASMI   GLG+ VL GI  L++G  
Sbjct: 265 SPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGRLDMGLA 324

Query: 257 MEAGLAIVALAMVIDRISQAYGRSSR 282
              GL IV LA+ +DR++QA G+S R
Sbjct: 325 TVGGLGIVLLAISLDRLTQAMGKSRR 350