Pairwise Alignments

Query, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

Subject, 307 a.a., ABC transporter membrane spanning protein (glycine betaine/L-proline) from Agrobacterium fabrum C58

 Score =  192 bits (487), Expect = 1e-53
 Identities = 103/256 (40%), Positives = 161/256 (62%), Gaps = 3/256 (1%)

Query: 21  VDWLVLNYGDHLRSLSDQLLQLLVGLENLLRLLPWWLLLLLVGLLAWHASRSLLRSAVLV 80
           V W+ LN      ++   +  LL   +++L  +P+ + L+L  L+A+  +   L  A+  
Sbjct: 20  VQWIALNLRPLFVAIKWPIENLLAFNDHILHAIPFPIFLVLSFLIAYRLAS--LGIAIFT 77

Query: 81  AL-LALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQT 139
           A+   +I  LG+WD+ + TL+L+  +  +  ++G+P+GI  A      +++ PVLD+MQT
Sbjct: 78  AISFVVIASLGVWDESMTTLSLISTAIVISTVIGIPVGIWCAINNSVWQVVRPVLDIMQT 137

Query: 140 LPAFVYLIPVLMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRW 199
            P FVYL+PV+MLFG+G VP   A +I A PPL+R T LG+  ++  +++A    GA R 
Sbjct: 138 TPTFVYLVPVVMLFGVGTVPGEVAVVIAAAPPLIRFTNLGIRMVETEMVEAGLAFGADRR 197

Query: 200 QRLRRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNVGQGMEA 259
           Q L  I  PLA+P+I+ GLNQ+V+ A+ M VV +MIGA GLG  VL G+  L+VG+    
Sbjct: 198 QLLWEIQFPLAIPTILGGLNQTVLTAMVMSVVVAMIGAEGLGLVVLQGLGRLDVGRAAVG 257

Query: 260 GLAIVALAMVIDRISQ 275
           G+AI+ LAM++DRI+Q
Sbjct: 258 GIAIILLAMILDRITQ 273