Pairwise Alignments

Query, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

Subject, 282 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  194 bits (492), Expect = 2e-54
 Identities = 103/254 (40%), Positives = 160/254 (62%), Gaps = 9/254 (3%)

Query: 29  GDHLRSLSDQLLQLLVGLEN----LLRLLPWWLLLLLVGLLAWHASRSLLRSAVLVALLA 84
           GD+   L D + +LL G  +    LL+L P  ++ L+  LL W   R +  +A ++A +A
Sbjct: 22  GDNGEGLFDFVSRLLEGSYDGILWLLQLAPPVVIALIAALLGW---RLINLAAGILAGVA 78

Query: 85  LI--GMLGLWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPA 142
           L+    +GLW + + TLALV  +T L +LVG+PLGI+        R+L P+LD++QT+P 
Sbjct: 79  LLFCATMGLWAETMSTLALVTTATILALLVGIPLGIIAGFTKSLDRVLEPILDLIQTMPP 138

Query: 143 FVYLIPVLMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRL 202
           ++YL+P + L G G   A+ AT I A+PP +RLT LG+       ++  H  G + WQ  
Sbjct: 139 YIYLLPAIALLGYGPATALIATFIVAMPPAIRLTSLGIRMTPREFIELGHASGLTPWQMF 198

Query: 203 RRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNVGQGMEAGLA 262
            +I LP A+PS+MAG+NQS+MMA  MVV+A ++G+ GLGE +   ++TL++   + A +A
Sbjct: 199 MKIRLPFAIPSVMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGAVRTLDIATSINAAIA 258

Query: 263 IVALAMVIDRISQA 276
           IV L MV+DR++Q+
Sbjct: 259 IVILTMVLDRLTQS 272