Pairwise Alignments

Query, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

Subject, 246 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

 Score =  121 bits (303), Expect = 2e-32
 Identities = 74/228 (32%), Positives = 122/228 (53%), Gaps = 4/228 (1%)

Query: 57  LLLLLVGLLAWHASRSLLRSAVLVALLALIGMLGLWDKLLQTLALVLVSTGLCVLVGVPL 116
           +L L++ L A      + R  V     A+     L+   L  L +V ++TGL  L    L
Sbjct: 14  VLALIIFLAAPQIFAPIFRPLVQANAPAIYTQANLFSLTLSHLTIVAIATGLATLTAGAL 73

Query: 117 GILLAARPLARRLL---LPVLDVMQTLPAFVYLIPVLMLFGLGKVPAVFATLIYALPPLV 173
            +L+  RP     L     ++++ QT P    L   + + G G+ P + A  +YAL P+ 
Sbjct: 74  AVLVT-RPFGADFLPLSRSIVNIGQTFPPVAVLALAVPMIGFGEKPTLIALFLYALLPVF 132

Query: 174 RLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPLALPSIMAGLNQSVMMALSMVVVAS 233
             T  GL+ +  +++ AA G G + WQRL ++ LPLALP+I+AG+  S +++LS   + S
Sbjct: 133 ENTLTGLTTLPATVMDAARGSGMTGWQRLTKVELPLALPAILAGVRLSAVISLSTATIGS 192

Query: 234 MIGARGLGEDVLAGIQTLNVGQGMEAGLAIVALAMVIDRISQAYGRSS 281
            + AR LGE ++AG+Q+ N+   ++ GL + ALA++I     A  RS+
Sbjct: 193 TVAARTLGEVIIAGLQSNNLAFILQGGLIVAALAILIHAGFSALERSA 240