Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 27/230 (11%)

Query: 8   LAGLLLTVGLASTDSAASAEQPAPIHFGAI-GWESGALTTEILRLIVERGYGYRTDTLPG 66
           L G   T+ +A + + ASA+    +  G + GW     TT +   +++   GY       
Sbjct: 6   LLGAAATLVVAMSSTLASADSKT-LSIGYVDGWSDSVATTHVAAEVIKSKLGYDVKLQAV 64

Query: 67  STVSMEVALARNDLQVIAEEWAGRSPAWVKAEQAGQVFALGDTVKNAEEGWWVPAYVIEG 126
           +T  M   +A   L  +   W   +     A+   +V   G   K+A+ G  VP YV   
Sbjct: 65  ATGIMWQGVATGKLDAMLSAWLPVTHGEYWAKNKDKVVDYGPNFKDAKIGLIVPEYV--- 121

Query: 127 DAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQKLKAYGLD 186
                      +  S+EDLK         ++  K + +   +G        + +K YGLD
Sbjct: 122 -----------KAKSIEDLK--------TDTTFKNKIVGIDAGSGVMLKTDEAIKQYGLD 162

Query: 187 GLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEEP 236
                 ++ SGAAM AE+  A  + + +    W P  +  ++KL  L++P
Sbjct: 163 ---YKLQASSGAAMIAELTRAEDKQESIAVTGWVPHWMFAKWKLRFLDDP 209