Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 85/354 (24%), Positives = 142/354 (40%), Gaps = 47/354 (13%)

Query: 4   ISTLLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYRTDT 63
           +S  LAG  L   L    ++ + ++   I  G   W        IL  I+          
Sbjct: 5   LSRGLAGFALLAALVPATASFAKDK---IVIGEQNWTGAIAIQYILGDIISNRLDGEVSY 61

Query: 64  LPGSTVSMEVALARND--LQVIAEEWAGRSPAWVKAEQAGQVFALGDTVKNAE-----EG 116
           L G    +  A A+ D  + V+ + W     A       G   +L   + N +     +G
Sbjct: 62  LAGDLPILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSL---IPNKQPYVGVQG 118

Query: 117 WWVPAYVIEGDAARNLKPVAPELHSVEDLKRYPQVFS--DPESPGKGRFLNSPSGWTSET 174
           +++P Y+ +     N+K       SV DLK+ P+V     P   GK + L  P+GW S  
Sbjct: 119 FYIPGYIQD---KYNVK-------SVYDLKK-PEVAKLFAPLGGGKSQLLVGPAGWESTY 167

Query: 175 VNSQKLKAYGLDGLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLE 234
           +   K K +G DG + +  S   +   A++ +A +  + V+FY + P  +   Y L RL+
Sbjct: 168 IGQIKAKDFGFDGNFESV-STEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLD 226

Query: 235 EPPFDAQA---------------WATLTDPANPNPKGSRSL-----PAKLSIGVSKAFRE 274
           EPPFD  A               W  ++   + +     S+      AK+ I  S A R+
Sbjct: 227 EPPFDGYAQDNKKGDPLYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQ 286

Query: 275 NYPDLVSVFEQVDLPIDRLNKALAVMSEKRTPPREAALTFLRDNREVWKAWLPA 328
             P + +  E V +    LN  +  +  ++ P   AA  ++  N+     WL A
Sbjct: 287 RAPRIAAFLENVSIDPASLNDLILKIEREKQPADAAAKAWVAANQATVDRWLSA 340