Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 74/343 (21%), Positives = 139/343 (40%), Gaps = 33/343 (9%)

Query: 7   LLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGY---GYRTDT 63
           LLA  ++   L    SA++AE P                  ++  IV +G+   GY+   
Sbjct: 10  LLASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALGYKVKL 69

Query: 64  LPGSTVSMEVALARNDLQVIAE-EWAGRSPAWVKAEQAGQVFALGDTVKNAEEGWWVPAY 122
              +T     A+A+ DL +  +  +  R P + K      +       K   EG  +  Y
Sbjct: 70  STVNTTLFFQAVAQGDLDIATDINFPQREPGFRKVADKADMIG-----KGLIEGGGINGY 124

Query: 123 VIEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQKLKA 182
           +I+   A      A  + +++ +K  P++ +   + GK   +N   GW+   V   +L  
Sbjct: 125 LIDKKTAD-----AYNIKTLDQMKD-PKIAALFGTDGKADLINCDPGWSCGDVVEYQLDK 178

Query: 183 YGLDGLYNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPT---PLMGRYKLIRLEEPPFD 239
           +GL     + R G   A+  E  +  +RG+PV FY W+P+     +   K +     PFD
Sbjct: 179 FGLKDTVKSVR-GKYEALMVEAVARAKRGEPVFFYAWSPSWMNKALQPGKDVVWLPTPFD 237

Query: 240 AQAWATLTDPAN--PNPKG--SRSLPAKLSIGV-------SKAFRENYPDLVSVFEQVDL 288
           A   +  +   N   N +G    + P ++++         +K F +  P++ S  E +  
Sbjct: 238 ALPPSVPSSGTNAVANVEGCAGAANPCRMAMAAWNWTAVGNKEFLKENPEVKSFVENMSF 297

Query: 289 PIDRLNKALAVMSEK---RTPPREAALTFLRDNREVWKAWLPA 328
           P+   +     +S+K       R  +  +L +N+ +   W+ A
Sbjct: 298 PLSTWSSWEQAISQKGGSDATVRGLSDAWLSENKALLDGWITA 340