Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 332 a.a., glycine betaine ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  163 bits (413), Expect = 5e-45
 Identities = 98/338 (28%), Positives = 167/338 (49%), Gaps = 15/338 (4%)

Query: 7   LLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYRTDTLPG 66
           LL   +L+ G A +  AA A     +   ++ W+S  +   + + I+E+GYG   + + G
Sbjct: 4   LLGATILSAGFAFSGGAAYAADCGNVTIASMNWQSAEVAANLDKFILEKGYGCSAEIVTG 63

Query: 67  STVSMEVALARNDLQVIAEE-WAGRSPAWVK-AEQAGQVFALGDTVKN-AEEGWWVPAYV 123
            TV    ++A      IA E W    P  VK   + G+V A    + + A +GWW+P Y+
Sbjct: 64  DTVPTLTSMAEKGQPDIAPEAWVSLQPEIVKHGLEGGKVVAAAKILSDGAVQGWWIPKYL 123

Query: 124 IEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQKLKAY 183
            + +         P+L ++ DL ++P++F  PE   KG   N P GW    V +Q  KA+
Sbjct: 124 ADAN---------PDLKTIPDLFKHPELFPAPEDKSKGAVFNGPQGWGGTVVTAQLFKAF 174

Query: 184 GLDGL-YNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLE-EPPFDAQ 241
           G +   +    +GS A +D  I  A    +P + YYW PT L+G+Y++++L     +DA 
Sbjct: 175 GGEKAGFTLVDTGSAAGLDGSIAKAYEAKQPWVGYYWAPTSLLGKYEMVKLGFGTEYDAA 234

Query: 242 AWATLTDPAN-PNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKALAVM 300
            W   T  A+ P+PK +      +   VSK+F +     +    +       +NK +A M
Sbjct: 235 EWKRCTSVADCPDPKPNAWQVDDVQTLVSKSFADRAGPAMDYLNKRAWTNATVNKLIAWM 294

Query: 301 SEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338
           ++ +    + A  FL++N  +WK W+  ++A KV+A+L
Sbjct: 295 TDNQATGEDGAKQFLKENEALWKGWVSPEVAEKVKAAL 332