Pairwise Alignments

Query, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 336 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score =  121 bits (303), Expect = 3e-32
 Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 19/342 (5%)

Query: 7   LLAGLLLTVGL----ASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYRTD 62
           LLA  +L  G      + +SA +AE    I    + W S  +   + + I+E GY    +
Sbjct: 4   LLASTILVTGFITAAGAANSANAAETCGNITIAEMNWASAGVAAYVDKFIMENGYDCTVN 63

Query: 63  TLPGSTVSMEVALARNDLQVIAEE-WAGR--SPAWVKAEQAGQVFALGDTVKNAEEGWWV 119
            + G T     ++       +A E W     +P     ++   +  +    +   EGWW+
Sbjct: 64  VISGDTTPTFTSMNEKGQPDMAPEMWVNTLGTPYEEAVKKGNLIQEVKILSEGGVEGWWI 123

Query: 120 PAYVIEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQK 179
           P Y+ +           P++ +VED  ++P++F  PE   KG     P GW  +   +  
Sbjct: 124 PKYLADEH---------PDIKTVEDALKHPELFPAPEDASKGAVFGCPPGWGCQPTTANL 174

Query: 180 LKAYGLDGL-YNNFRSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLEE-PP 237
            KA   D   +    +GS A +D  I +A  + +  L YYW+PT ++G+Y +++L++   
Sbjct: 175 FKARKADEKGFALIDTGSAAGLDGSISNAYEKKQGWLGYYWSPTAILGKYDMVKLDDGVA 234

Query: 238 FDAQAWAT-LTDPANPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKA 296
            D +A+ T +  P   +PK +    A++   V+K F E     +    +       +   
Sbjct: 235 LDREAYDTCIAKPDCADPKPNAYPVAEVFTVVTKDFAEKAGPSIDYIRKRQWDNATVAGV 294

Query: 297 LAVMSEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338
           LA M + +    + A  FL ++ ++W  W+  ++A K++AS+
Sbjct: 295 LAWMDDNQGTNEDGAEYFLENHEDIWTKWVSPEVAEKIKASM 336