Pairwise Alignments

Query, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  467 bits (1201), Expect = e-135
 Identities = 271/711 (38%), Positives = 416/711 (58%), Gaps = 6/711 (0%)

Query: 7   SIQWKITLLAGLCLAAIVTLLVGLSLYRMDHSSDLVKASSMQMLTEAAQSRIESQGEVQA 66
           SIQ+ +  LAG  + ++V +LV  +L+    + ++V+  +     +  + R+ +  + QA
Sbjct: 5   SIQFSVAALAGAIVLSVVAVLVLYALFAGARTQEMVQDRTQVQFEQIIEQRLTALAQTQA 64

Query: 67  LNIRRQFMDAYQYGAGFARQVLFLREQAEKRFLDAFDLREDMTRQVRAALQANPDLLGLS 126
             I+R+           A     L  +  K        RE +   +   +  NP +LG  
Sbjct: 65  TLIQRELEAPLVTAKSLATANALLGMKDAKGEPALQVSREQLINLLHETVVRNPKILGAY 124

Query: 127 LVFEPNALDNKDSLFAGKAELGSNETGRFALYWSQPRAGQLTSMALPEHDMANTEIGPSG 186
           + +EPNA+D+ D+ +     +G    GRF  +W +   G L    L   D+ +  I  +G
Sbjct: 125 IGWEPNAIDHNDAAYVNSPIVGMAADGRFLPWWYRNADGSLGLDKLA--DVNDQNILSTG 182

Query: 187 QPANTWWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDINLNSLQ 246
             A+ +++C + + K C ++P  Y +    V++ S + P+ ++G     +  D+++N +Q
Sbjct: 183 VRASEYYLCSKENKKACAIDPAPYKVGNAMVMLASFIEPIMIDGAFQGIVGADLSVNFIQ 242

Query: 247 ALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVRKLADGKL 306
            +   A + LY G   + +++  G L  Y+ DASKL ++   +  +     + +L  G++
Sbjct: 243 DMLTSADQKLYNGAGEMALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEV 302

Query: 307 TTLHDRQRLKVLAAFRPIPDAQP---WGVLLDVPENALTGPAETLKQELDALNTSGTLLE 363
               D++   +   F P    Q    W ++L +P +A+   ++ L+ +L+A   +     
Sbjct: 303 RYDIDKEHGHI-ELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGM 361

Query: 364 LSLGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGELAG 423
              GL  A +GLL++WL+  G+ RP+  + AML DIA GEGDLTRRLT  + DELG +A 
Sbjct: 362 TIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIAN 421

Query: 424 WFNRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHEMSA 483
            FN FL KLQ  I +V  SVQ    +++ ++ IA  T+ G+ +Q  ++DQVATA HEM+A
Sbjct: 422 GFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTA 481

Query: 484 TAQDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQNSEK 543
           TAQDVAR+A QAAQAA  ADQA  +G+ ++  T++SIGALA  +   ++ ++ LA++SE 
Sbjct: 482 TAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSEN 541

Query: 544 IGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQV 603
           I ++L  IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRNLAQ+TQ++ EE + +
Sbjct: 542 INAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTM 601

Query: 604 IEALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAAEEQ 663
           I+ LQ GTR+VV  M+ S  +    V+   +A  AL+ I QAV+VI DMN QIASAAEEQ
Sbjct: 602 IQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQ 661

Query: 664 SAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714
           SAVAE+IN NV  I  V   ++G A+ES+  S  L  LA QQ+ L++QF+V
Sbjct: 662 SAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712