Pairwise Alignments

Query, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  692 bits (1786), Expect = 0.0
 Identities = 372/709 (52%), Positives = 491/709 (69%), Gaps = 1/709 (0%)

Query: 6   LSIQWKITLLAGLCLAAIVTLLVGLSLYRMDHSSDLVKASSMQMLTEAAQSRIESQGEVQ 65
           LSI+ KI LL+GLCL  ++ L++ ++LY  + +  L+  SS +MLT + QS ++S+   Q
Sbjct: 5   LSIRLKIVLLSGLCLLGVIALIISINLYETNQNDQLISDSSSRMLTSSVQSLLQSKAGEQ 64

Query: 66  ALNIRRQFMDAYQYGAGFARQVLFLREQAEKRFLDAFDLREDMTRQVRAALQANPDLLGL 125
           A+ +++ F +        A QV  LR  A KR L+   LRE++ + ++   + N  +LG+
Sbjct: 65  AVLLQKTFGENLLVVTALADQVKDLRALAAKRALEPGALREELNQSLKTTFERNSKVLGI 124

Query: 126 SLVFEPNALDNKDSLFAGKAELGSNETGRFALYWSQPRAGQLTSMALPEHDMANTEIGPS 185
            L FEPN LD KDS F       SNE GRF+ YWS+   G+  +  + E D+  T    S
Sbjct: 125 WLSFEPNGLDGKDSEFVDDKARVSNEKGRFSSYWSRA-GGEGLNTIMVEDDLTKTTPNLS 183

Query: 186 GQPANTWWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDINLNSL 245
           G P N W+ CPR + KVC+++PY  ++ G+Q+LMT+I  PL V+G +I  + IDI LN+L
Sbjct: 184 GTPYNIWYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVGIDIALNTL 243

Query: 246 QALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVRKLADGK 305
           QA++  A + L+ G   + IL+  GL+A  S     + +        +G E+V+ LA   
Sbjct: 244 QAVTDAAQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDS 303

Query: 306 LTTLHDRQRLKVLAAFRPIPDAQPWGVLLDVPENALTGPAETLKQELDALNTSGTLLELS 365
                    ++ +   +PI DA+ WGV++ +P N +      L+  LD    +GTL  L 
Sbjct: 304 PMIREQDHTIRAVYPVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGTLKALL 363

Query: 366 LGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGELAGWF 425
           +G AAA++GLLL+WL A GVTRPI  VAAMLKDIASG+GDLT+RL Y K+DELGELA WF
Sbjct: 364 VGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWF 423

Query: 426 NRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHEMSATA 485
           NRFLDKLQPTIA++K+S+  ARGTADQSSAIA +TS GM+ Q+R++DQVATAS+EMSATA
Sbjct: 424 NRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATA 483

Query: 486 QDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQNSEKIG 545
            DVA SA+ AA AAR ADQ+ REG+++I+++T  I +LA  +S  + E+E LA NSE+IG
Sbjct: 484 HDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIG 543

Query: 546 SVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQVIE 605
           SVLEVIRSIAEQTNLLALNAAIEAARAGE+GRGFAVVADEVRNLA+RTQ+SVEE R VIE
Sbjct: 544 SVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIE 603

Query: 606 ALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAAEEQSA 665
            +Q+GTR VV  M  S  QAQ    Q+ QA  AL +I  AVTVI+DMNLQIASAAE+QSA
Sbjct: 604 RIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSA 663

Query: 666 VAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714
           VAEE+N NV+ IR VTE+L+GQA ESA +S  LN+LA+QQ  LMDQFRV
Sbjct: 664 VAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712