Pairwise Alignments

Query, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 381 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  126 bits (316), Expect = 1e-33
 Identities = 115/354 (32%), Positives = 159/354 (44%), Gaps = 49/354 (13%)

Query: 12  DAITDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLLPRSA-- 69
           DA    AA W  R H      AE E F  WLAADP H E Y  +        LLP  +  
Sbjct: 29  DAAELQAALWASRRHDGLDAAAEAE-FQQWLAADPVHGELYDELDGSLDGVRLLPGDSIQ 87

Query: 70  ---TVIDFNPPARHAARP------------------RNWR-------PLASAAAIALAVL 101
                +  +  AR AA P                  RNW        P A+ A  A+AV+
Sbjct: 88  SLRATVQEDARARVAAVPPRRAPSPASRGSPASPGRRNWLLDLGRLVPQAALAGTAVAVV 147

Query: 102 PLAGWMGWEQGWL--PNHYQHFE-AGDRMQTVELSDGSTVQLNLHTELTFLNYKDQRQVT 158
              GW+GW   W   P   +H+  A  +   ++L DGS +QL+  T+     Y D R+V 
Sbjct: 148 G-GGWLGWAH-WRGQPIFEKHYATARGQSLNIDLPDGSALQLDAATQAQVRLYHDHREVR 205

Query: 159 LKRGEAFFKVRHDSSHPFIVRAGSGQTRVTGTQFNVWKYQ---DQVKVTL------VEGS 209
           L  G+A F V  +++ PF V AG  +  V GT+F+V   +   D  K T+      V  S
Sbjct: 206 LLDGQAMFIVSSNAAQPFHVLAGETRVVVVGTRFSVRHTRSGIDAGKTTVAVESGRVRVS 265

Query: 210 VLVSSEGSAGGYRLGPGMQASYHKGDFEPQLEQSDDYGNSLAWRSGKLVLDNLSLEQALP 269
            L S EG+      G G+ A    G   P +E +   G   AWR G++   +  L QAL 
Sbjct: 266 ALASVEGAGVELTAGQGVTAD-DAGRLAPVVEIAA--GGVAAWRQGRVSFTDTPLAQALA 322

Query: 270 VINRYLDAPLLLADASTGRIRISGIYNTREVGRLVNNLPKVLPVYLTRSKDGST 323
              RY D  L++ D + G +R+ G ++ RE+G     LP +LPV L R + G+T
Sbjct: 323 EFERYGDTGLVVRDPAVGALRLGGSFSLRELGTFAQALPVLLPVRLER-RGGAT 375