Pairwise Alignments

Query, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 330 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

 Score =  105 bits (263), Expect = 1e-27
 Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 35/326 (10%)

Query: 11  DDAITDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLLPRSAT 70
           D+A+   AA W   + + + T A+R  +  W  ADP H   +Q   ++ +   +LP   +
Sbjct: 11  DEAVAMQAAQWFFLMQSGEATSADRMRWTQWREADPSHEAAWQRAEQVSRKFGMLPGRLS 70

Query: 71  VIDFNPPARHAARPRNWRPLASAAAIALAVLPLAGWMGWE----QGWLPNHYQHFEAGDR 126
           +       R      + R      A+ L   P AGW+ W     + WL +H      G+R
Sbjct: 71  MPTLGRTVR-----ADRRVAVKTLALLLTAAP-AGWLAWRVSPAREWLADH--RTATGER 122

Query: 127 MQTVELSDGSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHD-------SSHPFIVR 179
            + + L DG+ +QLN  T +        R V L+ GE       D       +  PF+V 
Sbjct: 123 RE-LRLPDGTRIQLNTATAVDLAYDAKLRLVRLRAGEILIDTAPDAVASSDPAYRPFVVE 181

Query: 180 AGSGQTRVTGTQFNVWKYQD-QVKVTLVEGSVLVSSEGSAG-GYRLGPGMQASYHKGDFE 237
              G+ +  GT+F V +++D +  V ++EG+V +  + + G    L  G QA +     +
Sbjct: 182 TAQGRLKALGTRFVVRQHEDRRSHVAVLEGAVELRPDDARGLAMVLRAGEQAGFSDSAID 241

Query: 238 ---PQLEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGI 294
              P   ++DD      W  G L   N+ L+  L  + RY    +L  D +   +R+SG+
Sbjct: 242 AVTPVGPEADD------WSRGVLRARNMRLQDFLAELGRYRPG-VLRCDPAVADLRVSGV 294

Query: 295 YNTREVGRLVNNLPKVLPV---YLTR 317
           +   + G ++++LP+ LPV   Y TR
Sbjct: 295 FQLNDTGPVLDSLPQALPVDVLYRTR 320