Pairwise Alignments

Query, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 326 a.a., anti-FecI sigma factor FecR from Sphingobium sp. HT1-2

 Score =  122 bits (307), Expect = 9e-33
 Identities = 95/320 (29%), Positives = 144/320 (45%), Gaps = 9/320 (2%)

Query: 18  AAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLLPRSATVIDFNPP 77
           AA    RL+++   Q E E  A W+ ADPRH   +      W  A+ L  +A  ++  PP
Sbjct: 3   AARLLARLNSDPTPQDEDEICA-WIEADPRHGVAFARAEAAWDAAERLKSAAAEVNL-PP 60

Query: 78  ARHAARPRNWRPLAS----AAAIALAVLPLAGWMGWEQGWLPNHYQHFEAGDRMQTVELS 133
                     R L+     AA IA+A   +A  +        + Y+   A  +++ V L+
Sbjct: 61  LEAIVSEEQQRRLSRNIMIAAGIAIAFFIVAAIVTIRTFSGVDRYE--TAVGQIRDVALA 118

Query: 134 DGSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHPFIVRAGSGQTRVTGTQFN 193
           DGS + LN ++E         R+V + +GEA F V HD   PF V   S Q R  GT FN
Sbjct: 119 DGSILHLNSNSEAEVRFTDIGRKVRVLKGEASFDVAHDKGRPFDVEVRSAQIRAVGTAFN 178

Query: 194 VWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPGMQASYHKGDFEPQLEQSDDYGNSLAWR 253
           V      V++T+ +G+V V S G++G  ++  G  A       +             AWR
Sbjct: 179 VRMRPSVVELTVTQGTVTVHS-GNSGLEKVSAGSGAVIQSRSIDLTHLSPKLIDQRTAWR 237

Query: 254 SGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYNTREVGRLVNNLPKVLPV 313
              + LD  ++EQA    NRY  AP+L+ DA    +R+ G +   +    ++ L   LP+
Sbjct: 238 DQMVELDGETIEQAASEFNRYRRAPILIGDARVSSLRVGGRFRVSDSKEFLSALQLSLPI 297

Query: 314 YLTRSKDGSTVLNRISPPPG 333
                +DGS +L     P G
Sbjct: 298 RAVNGEDGSVMLLYRDEPDG 317