Pairwise Alignments

Query, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 333 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  114 bits (284), Expect = 4e-30
 Identities = 94/329 (28%), Positives = 144/329 (43%), Gaps = 20/329 (6%)

Query: 13  AITDAAAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEY---QAMLEIWQTADLLPRSA 69
           AI   AA   ++  A D  +   +A+A W+A DP H   +   +A  E+ +  + LP S 
Sbjct: 3   AIEAEAARLYLKARASDAPEDWNDAYA-WVALDPAHGFAFAKAEAGWELTERLNELPASQ 61

Query: 70  ---------TVIDFNPPARHAA--RPR--NWRPLASAAAIALAVLPLAGWMGWEQGWLPN 116
                     + D   P    A  RPR    R L    A A A + +A  +        +
Sbjct: 62  QDEPAVPVIALPDDPAPEEPIAEIRPRLVGRRGLLIGLATAAATIGVASTVALRLLGTVD 121

Query: 117 HYQHFEAGDRMQTVELSDGSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHPF 176
           HY+   A    +TV+L+DGS + LN ++ +      D RQ+TL +GEA F V HD   PF
Sbjct: 122 HYR--TALGETRTVQLADGSRIHLNTNSSVEVALRDDIRQITLLKGEAQFDVAHDKKRPF 179

Query: 177 IVRAGSGQTRVTGTQFNVWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPGMQASYHKGDF 236
           IV A     R  GT FNV    D  ++T++EG V V + G +   R+  G  A+   G  
Sbjct: 180 IVNADGTLVRAVGTMFNVRLRADVTELTVIEGIVAVRN-GDSAVRRIESGRSAAVRSGSI 238

Query: 237 EPQLEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYN 296
                +        AW++G +  +  +L QA+   NRY   PL++ D +   +R+ G + 
Sbjct: 239 AVTHLEPAKIRQRTAWQAGMVEFEGDTLAQAVEEFNRYRPTPLVIGDPAIASLRVGGAFR 298

Query: 297 TREVGRLVNNLPKVLPVYLTRSKDGSTVL 325
                  V+ L     +      D S +L
Sbjct: 299 LDRSQDFVDALESGFGIRAVPGSDNSIIL 327