Pairwise Alignments

Query, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 323 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 4e-26
 Identities = 85/300 (28%), Positives = 128/300 (42%), Gaps = 14/300 (4%)

Query: 18  AAHWCMRLHAEDCTQAEREAFADWLAADPRHAEEYQAMLEIWQTADLLPRSATVIDFNPP 77
           AA W  R    D  + E   F  W+  DP +   Y A   I   A    RS   +    P
Sbjct: 21  AADWVFRNRDPDQPETELAEFRRWMELDPENCRAYTAAKRILGEARTAIRSDAGLR-EAP 79

Query: 78  ARHAARPRNWRPLASAAAIALA---VLPLAGWMGWEQGWLPNHYQHFEAGDRMQTVELSD 134
              ++R RN   ++S  AIA A    + L G M      + +        D M  V L D
Sbjct: 80  VSSSSRGRN-AIISSVVAIAAAGTLFIALDGPMRMSADIMSDT-------DEMPEVTLED 131

Query: 135 GSTVQLNLHTELTFLNYKDQRQVTLKRGEAFFKVRHDSSHPFIVRAGSGQTRVTGTQFNV 194
           GS VQLN  + +      ++R V L RG+AFF+V  D+  PF V A        GT F+V
Sbjct: 132 GSRVQLNASSAIALDFTSERRTVRLLRGQAFFQVSPDAKRPFSVSADDTLVTALGTAFDV 191

Query: 195 WKYQDQVKVTLVEGSVLVS-SEGSAGGYRLGPGMQASYHKGDFEPQLEQSDDYGNSLAWR 253
            +     ++ + E SV V   E  A   ++G G +   H  +      +  D   +LAWR
Sbjct: 192 RQSATDTRIAVTEHSVRVDFKEPGALPVKVGEGEEV-LHLNETGKSTIRKTDANTALAWR 250

Query: 254 SGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYNTREVGRLVNNLPKVLPV 313
            G+L +DN+ L   +  I R+    +++ + +T R  +SG     +    +N L   L +
Sbjct: 251 RGQLTVDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLRTALNI 310