Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  593 bits (1530), Expect = e-174
 Identities = 291/538 (54%), Positives = 370/538 (68%), Gaps = 2/538 (0%)

Query: 2   SIYAQGLMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALA 61
           S Y  GL     N   LTPL F++R A VY +  AVI+G +R  W+   QRCR+LASAL 
Sbjct: 3   SKYDVGLERRGANFRPLTPLHFLDRAAEVYPDRTAVIYGEVRYTWRMFAQRCRQLASALI 62

Query: 62  GRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLIT 121
             GI RGDTV++   NTP MLEA FG+P++GAV+N LN RLDA A+AF+L H EA++ + 
Sbjct: 63  SAGIERGDTVSIFSLNTPAMLEAQFGIPLSGAVINCLNSRLDAPAVAFILAHSEARIFLV 122

Query: 122 DREFHAVIEGALALLEHPPLVVDVDDPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEW 181
           DR+   V + AL L+E PP V+D+DDP   +   +   +YE  +  GDP     WP DEW
Sbjct: 123 DRQLAPVAQEALRLMEAPPRVIDIDDPSGADFPLLGDTEYETFIAAGDPAAELRWPQDEW 182

Query: 182 QAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAM-GHRPVYLWTLPMFHCNGWCYP 240
            AI+LNYTSGTTG+PKGVVYHHRGAYLNALG  +   M G RPVYLWTLP+FHCNGWC+ 
Sbjct: 183 DAIALNYTSGTTGDPKGVVYHHRGAYLNALGQIINGRMTGARPVYLWTLPLFHCNGWCFA 242

Query: 241 WTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQA 300
           W + A+ GT + +R+V  + +   I EH V+ LCGAPIVL  L +   +       P++ 
Sbjct: 243 WALAAVGGTQICMRKVSAEGMYQAISEHGVTLLCGAPIVLGFLADGAPSDWTPPAAPIRV 302

Query: 301 MVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQG 360
           +  GA+PPA V   + ++G +V H YG+TE++G  T+C   + WD L ++ER +  +RQG
Sbjct: 303 LSGGASPPAPVFKRLGELGFEVVHLYGMTEMHGVTTLCEPQEAWDDLDIDERMKHVARQG 362

Query: 361 VRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTG 420
           VR    D ++V DP TL+PVPRDG T+GE+FMRGN  MKGYLKNP+AT EAF   W+HTG
Sbjct: 363 VRAVLADEMIVGDPLTLEPVPRDGQTIGEVFMRGNIAMKGYLKNPKATEEAFAADWYHTG 422

Query: 421 DLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETP 480
           DLAV H DGYIE+KDR KDIIISGGENIS+IEVE+ALY H  +  AAVVA PD KWGETP
Sbjct: 423 DLAVIHDDGYIEVKDRSKDIIISGGENISSIEVEEALYSHPWIAGAAVVAVPDPKWGETP 482

Query: 481 CAFVALKPGRE-DTREADITSWCREHLAGFKVPKTVVFGELPKTSTGKIQKYVLRDRA 537
           CA V LKPG      EAD+  +CRE LA +K P+ V+F  L +T+TGK+QK+ LR  A
Sbjct: 483 CAVVELKPGAPGGITEADVIRYCRERLAAYKCPRHVLFEPLVRTATGKLQKFRLRTHA 540