Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 541 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  692 bits (1787), Expect = 0.0
 Identities = 336/537 (62%), Positives = 406/537 (75%), Gaps = 2/537 (0%)

Query: 3   IYAQGLMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAG 62
           IY Q L   A N   LTPL F+ER A+V+ ++ A++HG ++RN++E Y R RRLASALA 
Sbjct: 4   IYDQDLERNAANFQPLTPLGFLERAASVFPDHTAILHGKLKRNYREFYARSRRLASALAK 63

Query: 63  RGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITD 122
            G+G GDTVAVMLPN P MLEAH+GVPM GAVLN+LN RLDA  +AF L HGEAKVLITD
Sbjct: 64  VGVGVGDTVAVMLPNAPAMLEAHYGVPMVGAVLNSLNTRLDAAILAFTLDHGEAKVLITD 123

Query: 123 REFHAVIEGALALLEHPPLVVDVDDPEY-GEGRAVSQLDYEALLNEGDPEFAWEWPDDEW 181
           REF  VI+ ALAL    PLV+D DDPEY G G  +  ++YE  L  GD +FAW+ P+DEW
Sbjct: 124 REFSPVIKAALALAVRKPLVIDYDDPEYAGAGERIGVMEYEDFLATGDEDFAWKTPEDEW 183

Query: 182 QAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNGWCYPW 241
            AI+LNYTSGTTG+PKGVVYHHRGA+L A+GN +T  +G  PVYLWTLPMFHCNGWC+PW
Sbjct: 184 DAIALNYTSGTTGDPKGVVYHHRGAHLLAVGNVVTCGLGKHPVYLWTLPMFHCNGWCFPW 243

Query: 242 TITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAM 301
           +IT +AGTHV LR+V  + +   I +HKV+H+CGAPIV++ L+N  EA K  +   V+ +
Sbjct: 244 SITLVAGTHVCLRQVRAKAMFDAIADHKVTHMCGAPIVMSTLLNAAEADKRPLPSRVEFI 303

Query: 302 VAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQGV 361
            A A PP  V+ A++  G  V H YGLTEVYGP  V  WH EWDAL  ++RA +KSRQGV
Sbjct: 304 TAAAPPPEAVLAAMQDAGFNVVHVYGLTEVYGPAVVNDWHAEWDALDAKQRAFLKSRQGV 363

Query: 362 RYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTGD 421
           RY  L+ L V DP+T+ PVP DG+TLGE+  RGN VMKGYLKNP AT ++F GGWFH+GD
Sbjct: 364 RYSALEALDVMDPETMVPVPADGETLGEVMFRGNVVMKGYLKNPSATEKSFAGGWFHSGD 423

Query: 422 LAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPC 481
           L V H DGYI++KDR KDIIISGGENIS+IEVEDALYKH A+  AAVVA+PDEKWGETP 
Sbjct: 424 LGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAIAAAAVVAKPDEKWGETPV 483

Query: 482 AFVALKPGREDTREADITSWCREHLAGFKVPKTVVFGELPKTSTGKIQKYVLRDRAK 538
           AFV L+ G   T E DI + CR HLA +K P+ VVF E+PKTSTGKIQK+ LR+ AK
Sbjct: 484 AFVELRDGMSATAE-DIIAHCRAHLAAYKCPRHVVFEEIPKTSTGKIQKFRLRELAK 539