Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  259 bits (663), Expect = 1e-73
 Identities = 173/515 (33%), Positives = 274/515 (53%), Gaps = 25/515 (4%)

Query: 37  VIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLN 96
           V    +R  +    +R  RLA+ L   G+  GDTVAVM  ++   LE  F +PM GAV++
Sbjct: 37  VYRDKLRYTYPTLIERVARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVIH 96

Query: 97  TLNVRLDAEAIAFMLQHGEAKVLITDREF---HAVIEGALALLEHPPLVVDVDDPEYGEG 153
           T+NVRL  E I + + H E + ++ + EF   +  I G L  ++   L+ D D       
Sbjct: 97  TINVRLSPEQILYTMNHAEDRFVLVNSEFVGLYQAIAGHLTTVDKTLLLTDGDSKTAELP 156

Query: 154 RAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGN 213
             V +  YE+LL    P++ ++  D+   A +  YT+GTTGNPKGV + HR   L+ +G 
Sbjct: 157 NLVGE--YESLLAAASPKYDFQDFDENSVATTF-YTTGTTGNPKGVYFTHRQLVLHTIGV 213

Query: 214 QMTWA-------MGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIR 266
                       +G   VY+   PMFH + W  P+  T L    V+  R DP+ ++ L R
Sbjct: 214 ATIMGSVDSVRLLGTNDVYMPITPMFHVHAWGLPYVATMLGLKQVYPGRYDPEYLVELWR 273

Query: 267 EHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQMGIKVTHTY 326
           + KV+     P +L  ++N  +AA+       + ++ G+A    +  A +  GI++T  Y
Sbjct: 274 KEKVTFSHCVPTILQMVLNA-KAAQGVDFGGWKIVIGGSALNRTLYEAAKARGIQLTAAY 332

Query: 327 GLTEVYGPVTVCAW-HDEWDALSLEERARIKSRQGVRYPTLDG-LMVADPQTLQPVPRDG 384
           G++E  GP+  CA  ++E  A + +ER   + + GV  P ++  +M A+   L   P DG
Sbjct: 333 GMSET-GPLVSCAHLNEELMAGTEDERITYRIKAGVPGPLVEAAIMDAEGNFL---PADG 388

Query: 385 DTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISG 444
           ++ GE+ +R   + +GY   P+  AE + GGW HTGD+A   A G I+I+DR+KD+I +G
Sbjct: 389 ESQGELVLRAPWLTEGYYNEPQKGAELWAGGWMHTGDVATLDAFGVIDIRDRIKDVIKTG 448

Query: 445 GENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGR----EDTREADITS 500
           GE IS++ +ED + +H AV E AVV   D +WGE P A + ++ G      + +E     
Sbjct: 449 GEWISSLALEDLVSRHPAVREVAVVGIADPQWGERPFALLVVRDGHVIGARELKEHLKPF 508

Query: 501 WCREHLAGFKVPKTV-VFGELPKTSTGKIQKYVLR 534
               HL+ + +P  + V  E+PKTS GK+ K  +R
Sbjct: 509 VELGHLSKWAIPSQIAVVTEIPKTSVGKLDKKRIR 543