Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  248 bits (633), Expect = 4e-70
 Identities = 169/506 (33%), Positives = 251/506 (49%), Gaps = 22/506 (4%)

Query: 36  AVIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVL 95
           A I G  +R W+E  +R  R+A+AL   G+  G  VA++  N+   LE  F VP  G  L
Sbjct: 19  ATISGDRQRTWKEVGERVPRMAAALRSLGVRDGAFVAILAMNSDRYLELFFSVPWAGGAL 78

Query: 96  NTLNVRLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEHPPL--VVDVDDPEYGEG 153
             LN+R  A    + L    A+VL  D  F   ++   A  E P +  V+ + D     G
Sbjct: 79  APLNIRWSAVENVYALTDSNAEVLFVDDSFLDQMDFLRA--ERPSIRHVIYMGDGPTPAG 136

Query: 154 RAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGN 213
                L YE L+ +  P    +  +D+   I   YT GTT +PKGV   HRG YL     
Sbjct: 137 ----MLAYEELVAQHAPMPDADRKEDDLYVIF--YTGGTTAHPKGVAMSHRGVYLATCCY 190

Query: 214 QMTWAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHL 273
                      +L+    FH  G    W IT  AGTH  L + +   ++  I +H+V++ 
Sbjct: 191 LALLPSVEDLTFLYVAGYFHFAGASALWYITLAAGTHAILPKFEALPVMKAIGQHRVTNA 250

Query: 274 CGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQM--GIKVTHTYGLTEV 331
              P ++N L++ P+  +  +      +  G+  P  ++    +M         YG+TE 
Sbjct: 251 VLVPTMVNMLLSHPDFKQYDLTSLKTCIYGGSPMPEGLMLRAMKMVPSWGFYQIYGMTET 310

Query: 332 YGPVTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIF 391
            G  T+  W D    +S E  +R++S     +     ++      ++    D   +GEI 
Sbjct: 311 GGFATMLRWRDH--IVSGENASRLRSAGQAGFGNEVRVV-----RIEGDDADVGEIGEII 363

Query: 392 MRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTI 451
           +R + +M GYL NPEATA   R GW HTGD     ADG++ + DR+KD+I+SGGEN+ +I
Sbjct: 364 VRSDFLMMGYLNNPEATAACLRDGWMHTGDAGYLDADGFLYVADRVKDMIVSGGENVYSI 423

Query: 452 EVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHLAGFKV 511
           E E AL+ H AV EAAV+  P E+WGE+  A V LK G   T E ++ + CR  + G+K 
Sbjct: 424 EPERALFLHPAVREAAVIGIPSEQWGESVHAVVVLKDGASATAE-ELIAHCRTLIGGYKC 482

Query: 512 PKTVVF--GELPKTSTGKIQKYVLRD 535
           P+++ F    LP T  GK++K VLRD
Sbjct: 483 PRSIEFRADPLPVTPVGKVRKNVLRD 508