Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (DmdB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  254 bits (650), Expect = 5e-72
 Identities = 177/513 (34%), Positives = 265/513 (51%), Gaps = 17/513 (3%)

Query: 38  IHGAIRRN-WQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLN 96
           + G I R+ W +   R R++A+AL G G+ +GD VA +  N    LE +FGV  TG VL+
Sbjct: 33  VEGDIHRSTWGQIASRSRQVANALDGLGLPQGDRVATLAWNGYRHLELYFGVSGTGRVLH 92

Query: 97  TLNVRLDAEAIAFMLQHGEAKVLITDREFHAVIEGALA---LLEHPPLVVDVDDPEYGEG 153
           TLN RL  E + +++ H E K +  D  F  +++   A    ++H   + D D      G
Sbjct: 93  TLNPRLHPEQLVWIVNHAEDKAVCFDMTFLPLVKAVAAKCPTVKHWIALCDADKLPADSG 152

Query: 154 RAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGN 213
               Q  YEA + +    +AW    DE  A S+ YTSGTTGNPK  +Y HR   L+A G 
Sbjct: 153 IPGLQ-SYEAWMGQQPTTYAWP-TFDENSASSMCYTSGTTGNPKAALYSHRSTLLHAFGA 210

Query: 214 QMTWAM--GHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFL-RRVDPQKILTLIREHKV 270
            +  AM    R   L  +PMFH N W  P+   A+    VF    +D + +  LI   KV
Sbjct: 211 ALPDAMCLSARDSVLPVVPMFHVNAWGLPYAAAAVGCKLVFPGAALDGKSVYELIEAEKV 270

Query: 271 SHLCGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAA-PPAKVIGAVEQMGIKVTHTYGLT 329
           +   G P V   L+   +A         + ++ G+A PPA +    +  G++V H +G+T
Sbjct: 271 TMAAGVPTVWQMLLGHLQANNLKFSTLNRTVIGGSACPPAMISAFNDVYGVEVLHAWGMT 330

Query: 330 EVYGPVTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGE 389
           E+    TVC   +   AL   E+ +++ +QG      D  +V +    + +P DG   G+
Sbjct: 331 EMSPLGTVCTLKNAQLALPPAEQLKVRLKQGRAIFGADMKIVNEAG--EELPWDGKAYGD 388

Query: 390 IFMRGNTVMKGYLKNPEATA---EAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGE 446
           + +RG  ++  Y K         +A   GWF TGD+A   ADG+++I DR KD+I SGGE
Sbjct: 389 LLVRGPWIIASYFKGEGGDPLRYDAQGHGWFPTGDVATIDADGFMQITDRSKDVIKSGGE 448

Query: 447 NISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHL 506
            IS+I+VE+    H AV  AA V     KW E P   V  KPG E +RE ++ ++    +
Sbjct: 449 WISSIDVENIAMAHPAVAMAACVGMRHPKWDERPIVVVVKKPGTELSRE-ELLAFYEGKI 507

Query: 507 AGFKVPKTVVFGE-LPKTSTGKIQKYVLRDRAK 538
           A +++P  VVF + +P  +TGK+QK  LR++ K
Sbjct: 508 AKWQIPDDVVFVDAIPLGATGKMQKMTLREQLK 540