Pairwise Alignments

Query, 468 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 880 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  181 bits (458), Expect = 1e-49
 Identities = 124/359 (34%), Positives = 195/359 (54%), Gaps = 22/359 (6%)

Query: 109 ARRLYRLIIENTTDLISRHSPDGRFLDASPAAYRLLGLWPEQLRGM-------PVHTLLH 161
           + R  + ++E    LI    PDG+ +  S    + LG   E   G         +  ++H
Sbjct: 510 SERHLQQLVETLPALIYCALPDGKPIYRSQRLRQYLGFNLEDTDGFGKSRLDGTLDAVIH 569

Query: 162 PRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRETYTGAVVEVVSVSR 221
           P +   V    A +L     +    R+R+  G YRW E  + A+R    G + +   +  
Sbjct: 570 PDDLAVVKEHYAHSLATGEPYLQRHRLRRFDGVYRWVETRASAMRNG-DGEIAQWNGICL 628

Query: 222 DITLRIEAQE-------SLAHSARLATLGELASGIAHEINQPLAAVVNYANASQRYLQGL 274
           DI  +++AQE       +LA S++ A+L EL++ IAHE+NQPL+AV+NY++A QR+L   
Sbjct: 629 DIEDQVQAQEELSRAHENLARSSQAASLAELSASIAHEVNQPLSAVMNYSSACQRWLTA- 687

Query: 275 ERDPQARERVGQGLQRISEQATHAAEVIRRLRAFLRKGPRRLQALDVAELAGEAMRLCAW 334
             +P   ER  + L+RI + A  AA+V+ R+RA  R+   +  + ++  +  +A  L A 
Sbjct: 688 --EPPNIERAQKTLERIVQSANSAADVVSRIRALFRQSTDKRDSTELGAVVRQARDLLAE 745

Query: 335 EAARDQVQVELRMSAQLPLVYADRVLLEQVLLNLLRNAIDANREQQGERPSRILLCAARD 394
           EA R ++++ +   + L LV  DRV ++QVL+NLLRN +DA      ER  ++   A R 
Sbjct: 746 EAGRRRIRMTVEGESGLLLVPFDRVQIQQVLVNLLRNGMDAMASVANERVLQVR--AFRA 803

Query: 395 GDGVLVEVADQGPGVAPERLDEIFTPFTTSKADGLGLGLSMSRSLIEGFGGSLWARAGD 453
           GD V +EVAD+G GV  +  D IF PF T+K  G+G+GL++ RS+IE   G LWA   +
Sbjct: 804 GDMVRIEVADRGRGV--QFPDRIFEPFFTTKDQGMGMGLAICRSIIEAHEGQLWAEKNE 860



 Score = 38.5 bits (88), Expect = 9e-07
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 153 GMPVHTLLHPRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRETYTGA 212
           G P   ++HP +R         +++    +    R  +A G YRW E  +  +R+  TG 
Sbjct: 428 GSPSLGVVHPEDRAAAREAFLRSVEAGIPYLQRYRQLRAGGSYRWTETRAEPLRDD-TGT 486

Query: 213 VVEVVSVSRDITLRIEAQESLAHSAR 238
           ++    VS DI   I  QE+L  S R
Sbjct: 487 IIYWYGVSSDIHDLITTQEALRESER 512



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 12/105 (11%)

Query: 130 DGRFLDASPAAYRLLGLWPEQLRGMPVHT------LLHPRERRQVLRQAAAALDQDGYHT 183
           +G F+  +PAA    G+  E L      +      ++HP +           L    ++ 
Sbjct: 43  NGNFIYVTPAALAFFGISLESLNSQSGESAFGWKRVIHPEDYESAAAAWRRCLRTGEHYN 102

Query: 184 MTCRVRQATGGYRWFEIASRAIRE------TYTGAVVEVVSVSRD 222
           +  R+ +ATG Y W     + IR+       + G V+++   SR+
Sbjct: 103 VEHRMLRATGVYGWARSTGQPIRDGNGVILGWYGTVIDIALASRE 147