Pairwise Alignments

Query, 210 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

Subject, 802 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  112 bits (281), Expect = 1e-29
 Identities = 60/192 (31%), Positives = 110/192 (57%)

Query: 6   VYVVDDDQGMRDSTVWLLQSVGLQALPFASGQAFLDACVDDGPACVLLDVRMPGLGGLAV 65
           + VVDD++ +RD    L +  G     + S + ++     D   C+L+D  +PG+ G+ +
Sbjct: 607 IEVVDDEKDIRDHLRALFEGEGWTVATYVSAEEYIADYKPDRSGCLLVDAYLPGMVGMEL 666

Query: 66  QQAMRERGLMVPVIFVSGHADVPIVVRAFKAGACDFIEKPYNDQLLLDSVQAALEHAGLA 125
            + ++ER    PVI ++GH+DV + + A + GA DFIEKP + Q L  SV++AL+ +  A
Sbjct: 667 LRLLKERQHRFPVIVITGHSDVRMAIDAMRYGAADFIEKPISYQELYRSVRSALDRSRDA 726

Query: 126 RQGDQALALVQARIDGLTPRERDVFVPLAQGLNNREIAEQLGISVKTVDLYRGRVMKRLQ 185
            + ++     +A +  LT ++R +   + QG  N+ IA  L +S +TV+ +R  +M+R +
Sbjct: 727 NEREERREAARATLATLTRKQRQILDRIVQGQANKIIAADLKLSQRTVENHRASIMRRTK 786

Query: 186 AGSLAELVGMAI 197
           + SL  L+ + +
Sbjct: 787 SASLPALLRLVL 798



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 24/94 (25%)

Query: 4   AKVYVVDDDQGMRD---------STVWLLQSVGLQALPFASGQAFLDACVDDGPACVLLD 54
           A V +++D+ GMRD           V    S G +AL    G  F        P  +L D
Sbjct: 464 ASVLIIEDENGMRDLLKMGLEQSGYVVAATSTGAEALAIVRGLQF-------KPDVILAD 516

Query: 55  VRMP-GLGGLA----VQQAMRERGLMVPVIFVSG 83
              P G  G+A    ++QA+R     VP + ++G
Sbjct: 517 YNFPTGGNGIAAIEDIRQALRRN---VPALILTG 547