Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 416 a.a., Colistin resistance protein EmrA from Xanthobacter sp. DMC5

 Score =  218 bits (554), Expect = 3e-61
 Identities = 138/363 (38%), Positives = 198/363 (54%), Gaps = 22/363 (6%)

Query: 13  APEPSRKRKAWLLGLLLLLILAGVGTWAWYSI----VGRWHESTDDAYVNGNVVEITPLV 68
           AP  +R RK ++ G +L ++    G   WY +    VGR+  STDDAYV  +   I   V
Sbjct: 54  APAKARSRKPFIFGTVLAVLAVAGG---WYGLNWWQVGRFQVSTDDAYVAADTSVIAAKV 110

Query: 69  AGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLA-------RSVRQVRGLYSN 121
            G V S+  D    V AG V+ + D  D  +ALQSAE K+A       R  +Q     + 
Sbjct: 111 GGYVKSVDVDTNQWVKAGDVIARIDDGDYRLALQSAENKIATQEATLSRFDQQETAARAT 170

Query: 122 VDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQL 181
           VD +KAQL + +A+ R+AQ +F+R+  LA S   +   L +AR D     A+V +A+  +
Sbjct: 171 VDQMKAQLASAEADQRRAQAEFDRQDKLARSDFASRSTLDNARADKDKTAASVEAAKAAI 230

Query: 182 STSSALV-----DDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQR 236
           +++ A V       T  S   D +  A D  +  LD   T + AP+ G V  R  Q+GQ 
Sbjct: 231 ASAEAQVVVLAAQRTEASHVLDELKTARDQAKRDLDF--TVVRAPIDGVVGNRAAQVGQL 288

Query: 237 LQPGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGT 296
           +Q GT  +AV+PL+ V++DANFKETQL  ++ GQ V +  D Y  +  ++G V S+   +
Sbjct: 289 VQTGTRLVAVVPLESVYVDANFKETQLGRLKPGQSVNVYVDAY-PDHDFAGKVVSVSPAS 347

Query: 297 GSAFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQSGPTLA 356
           GS F+LLP +NATGN+ KIVQR+PVRI + P+ L  H LR G+S    VD       + A
Sbjct: 348 GSVFSLLPPENATGNFTKIVQRIPVRIAIDPNVLAKHELRPGMSVTATVDTKSAPATSTA 407

Query: 357 QQP 359
             P
Sbjct: 408 AAP 410