Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 387 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  177 bits (450), Expect = 4e-49
 Identities = 111/352 (31%), Positives = 185/352 (52%), Gaps = 16/352 (4%)

Query: 11  SVAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAG 70
           ++ P P++ ++   L   L+ I+A      WY   GR++ESTD+AYV G +  I+  +  
Sbjct: 33  TIVPMPAQLKRRLTLFFALVAIIALAFLGHWY-FKGRFYESTDNAYVQGEITRISSQLGA 91

Query: 71  TVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLAR---SVRQVRGLYSNVDSL-- 125
            + ++  +D   V  G +L++ + AD E+A++ A A LA       Q +   +   SL  
Sbjct: 92  RIETVPVEDNQHVSKGDLLVRLEAADFELAVERARAALATREAEYAQAQSRLTQQGSLIA 151

Query: 126 --KAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLST 183
             +AQL   QA   +++ D +R + L   G ++ E ++    D  VA + V+ AR  L +
Sbjct: 152 AGQAQLAATQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVAGSQVDKARADLQS 211

Query: 184 SSALVDDTVVSSH-----PDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQ 238
               V  T +++        +  A  DL QA L+  R  + AP++G + +R  + GQ +Q
Sbjct: 212 QRQQV--TALNAELKRLDAQIANARTDLAQAELNLTRCEIHAPISGTIGQRNARNGQVVQ 269

Query: 239 PGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGS 298
            G   ++++P + +W+ ANFKETQ+  M  GQ  E+  D Y  +    G VDSL A +G+
Sbjct: 270 AGAYLLSIVPDEDIWVQANFKETQIGRMHPGQRAELLFDSY-PDTPIEGRVDSLFAASGA 328

Query: 299 AFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQ 350
            F+LLP  NATGN+ K+VQR+P+++    D      +R G+S    VDL  +
Sbjct: 329 QFSLLPPDNATGNFTKVVQRIPIKLTFHADNPLHGRIRPGMSVTATVDLRSE 380