Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 390 a.a., multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score =  328 bits (840), Expect = 2e-94
 Identities = 176/389 (45%), Positives = 243/389 (62%)

Query: 1   MATPTDTPTPSVAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGN 60
           M+   +T TP    + S KRK  LL L LL I+  V    ++ +V R  E TDDAYV GN
Sbjct: 1   MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGN 60

Query: 61  VVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYS 120
            ++I   V+G+VT + AD+ D V  G VL+  DP D+  A + A+  LA SVRQ   L  
Sbjct: 61  QIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMI 120

Query: 121 NVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQ 180
           N   L+A +E ++  L KAQ D+NRR  L ++  I  EEL HARD ++ AQA ++ A QQ
Sbjct: 121 NSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQ 180

Query: 181 LSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPG 240
            + + A++  T +   P V  AA ++R A+L   RT +++P+TGYV++R VQ G ++ P 
Sbjct: 181 YNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPT 240

Query: 241 TATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGSAF 300
           T  MAV+P   +W+DANFKETQ+  MRIGQPV IT D+YG +VKY+G V  L  GTGSAF
Sbjct: 241 TPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAF 300

Query: 301 ALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQSGPTLAQQPP 360
           +LLPAQNATGNWIK+VQR+PVRI L   QL+ +PLRIGLST+V V+  ++ G  LA +  
Sbjct: 301 SLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVR 360

Query: 361 QKASYTTQVYDHQLMEADNLIARLIHENS 389
                 +   +  L   + LI  ++  N+
Sbjct: 361 STPVAVSTAREISLAPVNKLIDDIVKANA 389