Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 392 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  417 bits (1072), Expect = e-121
 Identities = 207/384 (53%), Positives = 281/384 (73%), Gaps = 1/384 (0%)

Query: 6   DTPTPSVAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEIT 65
           +T T S  P  SR RK +   LLL+L+L   G+ A+Y +  R++E+TD+AYV GN++ +T
Sbjct: 2   ETTTHSSEPRASR-RKGYFAILLLVLLLGAAGSTAYYQLYLRFYETTDNAYVGGNLITLT 60

Query: 66  PLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSNVDSL 125
           P V GTVT +  DDGD V  GQ+L+Q   +D+ +ALQ +EA+LA +VRQVRGLYS VD+ 
Sbjct: 61  PQVGGTVTQVSVDDGDYVEKGQLLVQLSQSDTLIALQQSEAQLASAVRQVRGLYSTVDNY 120

Query: 126 KAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSS 185
           +AQ+ +RQ  L++A  D+NRRK LA  GAI+AE+L+H +D ++ A++A+++A Q L T+ 
Sbjct: 121 QAQVASRQVALQQAIGDYNRRKGLATKGAISAEDLAHYQDAVNSARSALDAAEQALRTNQ 180

Query: 186 ALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPGTATMA 245
           A VD+TV+  HPD+  A ADLR  YLD AR+ +VAPV+GYVA+R VQ+G R+  G   M 
Sbjct: 181 ARVDNTVLDDHPDIKNAVADLRSKYLDWARSAVVAPVSGYVARRAVQVGMRVSAGATLMT 240

Query: 246 VIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGSAFALLPA 305
           ++PLDQVW+DANFKE+Q+ +MR+GQPV +TAD+YG +  Y GT+ SLG GTGSAF+LLPA
Sbjct: 241 IVPLDQVWVDANFKESQMLQMRLGQPVTLTADIYGDKNVYHGTIQSLGIGTGSAFSLLPA 300

Query: 306 QNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQSGPTLAQQPPQKASY 365
           QNA+GNWIKIVQR+PVRI L P+ LK  PLRIGLS +  VDLH+  G  L   P     Y
Sbjct: 301 QNASGNWIKIVQRLPVRIALEPEGLKQRPLRIGLSMLANVDLHNTQGELLPAAPVNAPRY 360

Query: 366 TTQVYDHQLMEADNLIARLIHENS 389
            T VYD  L +ADNL+A+++ +NS
Sbjct: 361 RTDVYDDPLRQADNLVAKILRDNS 384