Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 355 a.a., secretion protein from Agrobacterium fabrum C58

 Score =  158 bits (400), Expect = 2e-43
 Identities = 113/315 (35%), Positives = 166/315 (52%), Gaps = 28/315 (8%)

Query: 50  ESTDDAYVNGNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDP-------ADSEVALQ 102
           E TD+A+V G V  ++P V+G V ++   D   V  G +L + D        A +E  L 
Sbjct: 38  EMTDNAFVRGYVTTMSPQVSGYVVNVPVKDYQEVKQGTLLAKIDDRIYHQKQAQAEATLD 97

Query: 103 SAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGA-------I 155
           + +A L  S +Q     +N+ S +A +++ +A L++AQ   +R+  L  SG         
Sbjct: 98  THKAALDNSRQQENAANANIRSSEAAVDSAEASLKQAQLASDRQDNLIKSGVGTSSLQEE 157

Query: 156 AAEELSHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDVMAAAADLRQAY----L 211
           A   L  AR  LS A+AA+  +RQ L T        ++ +   + AA A+   A     +
Sbjct: 158 AHAALEKARASLSQAKAALEVSRQDLQT--------IIVNRSSLQAAVANAEAAVELARI 209

Query: 212 DHARTTLVAPVTGYVAKRTVQLGQRLQPGTATMAVIPLDQVWIDANFKETQLREMRIGQP 271
           D A T + APV G + +  V+ GQ +  GT  MAV+P D VW+ ANFKETQL  M++GQP
Sbjct: 210 DLANTEIRAPVDGRLGEVGVRTGQYVTAGTQLMAVVPHD-VWVIANFKETQLAGMQVGQP 268

Query: 272 VEITADVYGSEVKYSGTVDSLGAGTGSAFALLPAQNATGNWIKIVQRVPVRIHLSPDQLK 331
           V I+ D      K +G V+     TGS FA++   NATGN++KI QR+ VRI +  DQ  
Sbjct: 269 VTISVDALHRR-KLTGHVERFSPATGSEFAVIKPDNATGNFVKIAQRLGVRIVIDADQPL 327

Query: 332 DHPLRIGLSTVVEVD 346
              L  G+S VV +D
Sbjct: 328 AAELSPGMSVVVHLD 342