Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 537 a.a., Colistin resistance protein EmrB from Xanthobacter sp. DMC5

 Score =  251 bits (640), Expect = 6e-71
 Identities = 147/495 (29%), Positives = 245/495 (49%), Gaps = 11/495 (2%)

Query: 26  FMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEVKLFI 85
           FM +LD  I + +L  I   L  S ++ +WV TS+ ++  + +PL+G+LSR      LF 
Sbjct: 45  FMAILDIQIVSASLAEIQAGLAASSDEISWVQTSYLIAEVVMIPLSGFLSRALSTRWLFA 104

Query: 86  WATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGMALALL 145
            +   F + SF+C  A S+ E++ +R LQG + G + P       +V+P  K+ +   ++
Sbjct: 105 ASAAGFTIMSFMCATASSINEMIVYRALQGFLGGGMIPTVFAAAYSVFPREKQPIVAPMI 164

Query: 146 AMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAA-AVVRQQMRTRPVVTSRQPMD 204
            +V  +AP  GP +GG++TD +SW W+F INV  G+F   A V       P  +     D
Sbjct: 165 GLVATLAPTIGPTVGGYLTDLFSWHWLFLINVIPGMFVVLAAVTLIDFDEPDFSLLDKFD 224

Query: 205 YIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTDRHPVVNL 264
           + GLL +   +G+L+ VL++G   DWFE  +I+  +++  V    F     +  HPVV+L
Sbjct: 225 WWGLLFMAGFLGSLEFVLEEGPTNDWFEDQYIVAFAIVCAVSSLAFFARVFSTDHPVVDL 284

Query: 265 RLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGLLPVIMSP 324
           R F +RNF IG+        G +G+  + P +L    GY+A   G  +   G+   + +P
Sbjct: 285 RAFENRNFTIGSAFSFIMGIGLYGLTYLYPVFLGRVRGYSALQIGETMFVTGIAMFLTAP 344

Query: 325 FVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGIGVALFFMPTL 384
             G+   + D R++ G  F A     +     T + DF  + + Q+  G+G+ +  +P  
Sbjct: 345 IAGRLMTKIDPRIMMGAGFAAFAVGTWWVTFITKDWDFWELFVPQILRGVGLMIAMIPIN 404

Query: 385 SILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYLSEHISQFDPTT 444
           +I L  +PP Q+ + SGL   +R LGG+   +L   +   R D H A L EH+     T 
Sbjct: 405 NISLGTMPPAQMKNASGLFNLMRNLGGAVGLALINTVLNNRWDLHIARLHEHVEWASATA 464

Query: 445 RHTLEQL--------GGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGLILLVWFA 496
              L+ +          AS  +  Q+  I+  QA +M+  D F L++++F  L++     
Sbjct: 465 VERLDTITAGFAKLGSDASSAALKQMAAIVRQQALVMAFADVFYLLTFLFFALVIASPLM 524

Query: 497 KPPFTAKAGPASAGH 511
           + P     G    GH
Sbjct: 525 RRPKPGAGG--GGGH 537