Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 508 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Sphingobium sp. HT1-2

 Score =  375 bits (962), Expect = e-108
 Identities = 194/505 (38%), Positives = 292/505 (57%), Gaps = 10/505 (1%)

Query: 10  TPPSLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALP 69
           +P +  L  + L+L+ FM VLD TIANV++P I+GNLG+S +QGTW+ITS+AV+ AI +P
Sbjct: 11  SPRTRTLAGLVLALSNFMVVLDLTIANVSVPHIAGNLGISGDQGTWIITSYAVAEAICVP 70

Query: 70  LTGWLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLL 129
           LTGWL+ RFG V+ FIWA + F   S +CG++ ++  +V  R+ QG+  GP+ PM+QTLL
Sbjct: 71  LTGWLALRFGVVRTFIWAMIGFGFFSMMCGLSTTLGMIVAARLGQGICGGPIMPMSQTLL 130

Query: 130 IAVYPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQ 189
           + ++PP  R  A+ L AM T++ P  GPI+GG+I+D++SW WIFFIN+PI          
Sbjct: 131 LRIFPPEMRPRAMGLWAMTTLLGPAMGPIVGGYISDNWSWHWIFFINLPIAALCVFAAMA 190

Query: 190 QMRTRPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAV 249
            +R     T+ QP+D IGL  LI  +G LQV+LD G D DWF    I+  ++++ +   V
Sbjct: 191 MLRPVETDTAHQPIDKIGLCLLIFWIGCLQVMLDIGRDHDWFSDPLILTLAILAGIGFIV 250

Query: 250 FVIWELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAG 309
           F+IWELT+ HP+V+LR+F H  F  G   L   +  +F   +++PQWLQ  MGYTATW+G
Sbjct: 251 FIIWELTEEHPIVDLRVFRHIGFSSGVFTLALAFGAYFSSIVVIPQWLQMSMGYTATWSG 310

Query: 310 LAVAPIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQ 369
           +  A   +  V+ +PF  ++  + D R++   A   +G     RA +TS +DF  +AL Q
Sbjct: 311 IVTAFTAMAAVMSAPFAARFTGKVDPRIMISGAVFWLGCMTLWRAHWTSGIDFFGLALPQ 370

Query: 370 LFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQH 429
              G  +  F +P  ++ L  +PP + A  +GL  FLRT+  + A SL    W   +D  
Sbjct: 371 FVQGFAMPFFMIPLTTLTLGSVPPSETASAAGLQNFLRTMAIAIATSLVLTGW---SDSQ 427

Query: 430 HAYLSEHISQFDP-TTRHTLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAG 488
               +E      P   +  L  +G  + Q    +  ++  +A  +S    F + + V   
Sbjct: 428 RVSRNELAGALQPDDAQRALSGMGMTTEQIRQTISNLVEQEAIAISVDYVFFISALVLFA 487

Query: 489 LILLVWFAKPPFTAKAGP--ASAGH 511
             ++VW A  P    +GP   SA H
Sbjct: 488 AAVIVWLAPKP----SGPVDTSAAH 508