Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 504 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

 Score =  250 bits (639), Expect = 7e-71
 Identities = 137/482 (28%), Positives = 253/482 (52%), Gaps = 7/482 (1%)

Query: 16  LTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLS 75
           +  +G     FM  ++  + + ALP I G+LG S+E+G+W+ T++ V+  + +PLT WL 
Sbjct: 13  VAVLGGLFGCFMAGMNVHVTSAALPEIRGSLGASFEEGSWISTAYLVAEIVMIPLTAWLV 72

Query: 76  RRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPP 135
             F   ++    +L+F++AS  C  A ++  ++  RV+QG     L P++  L+I   P 
Sbjct: 73  DVFSLRRVMWTGSLIFLIASVACSWAPNLEAMIVIRVIQGAAGAVLIPLSFQLIITELPA 132

Query: 136 AKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRP 195
           +K  M +AL ++   VA  AGP +GGW+TD+YSW WIF++ +  G+     +   +  +P
Sbjct: 133 SKMAMGMALFSLANSVAQAAGPSIGGWLTDAYSWRWIFYLQLFPGIALLLAIAWSIEAKP 192

Query: 196 V-VTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWE 254
           + +   +  D++G+  ++IG+G LQ+VL++G  LDWF S  I+  S+++ + L VFV+ +
Sbjct: 193 MKLELLRKGDWLGIAAMVIGLGGLQIVLEEGGRLDWFGSPLIVGMSVVAAIALVVFVVTQ 252

Query: 255 LTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAP 314
           L  +   +NLRL  H NF + ++ +    A  FG+  ++P +L    G++A   G+A+  
Sbjct: 253 LFGQRAFINLRLLGHYNFGVASVAMFIFGAATFGLVFLVPNYLSQLQGFSAHDVGVALIA 312

Query: 315 IGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGI 374
            G++ ++++P + +       + +    FL +   C++ AG +++     +    +  GI
Sbjct: 313 YGVVQLLLAPLMPRLMGWTSAKFMVASGFLIMALGCWLGAGLSADSADNVIIPSTVVRGI 372

Query: 375 GVALFFMPTLSIL-LSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYL 433
           G   F M  LS+L ++ L   +    S + + LR LGG+   +  T +   R   H   +
Sbjct: 373 GQP-FIMVALSVLAVAGLDKREAGSASAVFSMLRNLGGAIGTAGLTQLVATRERFHSERI 431

Query: 434 SEHISQFDPTTR----HTLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGL 489
            E ++ F+P+ +     T++       Q    LE  +  +AY+M+  D F L      G 
Sbjct: 432 HEQVTLFEPSVQARINQTVQSWLPPQQQMLEALEATIRREAYLMAYSDAFYLACLALVGC 491

Query: 490 IL 491
            L
Sbjct: 492 AL 493