Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 516 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

 Score =  247 bits (630), Expect = 8e-70
 Identities = 148/497 (29%), Positives = 242/497 (48%), Gaps = 5/497 (1%)

Query: 16  LTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLS 75
           +  + + L  FM VLD  I N +L  I G L  + E+G+W+ TS+ V+  I +PLT WL 
Sbjct: 19  IAVMSVMLGAFMAVLDIQITNSSLKDIQGALSATLEEGSWISTSYLVAEIIMIPLTAWLV 78

Query: 76  RRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPP 135
           +     +L +W +  F+L+S LC +A ++  ++ FR LQG   G L P+  TL +   P 
Sbjct: 79  QLLSARRLAVWVSGGFLLSSLLCSMAWNLESMILFRALQGFTGGALIPLAFTLTLIKLPE 138

Query: 136 AKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRP 195
             R   +A+ AM    AP  GP LGGW+T+++ W +IF+IN+P GL   A +   +  + 
Sbjct: 139 HHRAKGMAMFAMTATFAPSIGPTLGGWLTENWGWEYIFYINIPPGLLMIAGLLYGLEKKE 198

Query: 196 VVTS-RQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWE 254
                 +  DY G++TL +G+G LQV L++G+  DW ES  I+    +++V L  FVI +
Sbjct: 199 AHWELLKSTDYAGIVTLGLGLGCLQVFLEEGHRKDWLESHLIVGLGSVALVSLITFVILQ 258

Query: 255 LTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAP 314
            +  HP++NLR+  +RNF + +I  +G   G +G   +LP +L    GY A   G  +  
Sbjct: 259 FSKPHPLINLRILGNRNFGLSSIASLGMGVGLYGSIYLLPLYLAQVQGYNALQIGEVIMW 318

Query: 315 IGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGI 374
           +G+  + + P V +       +VL  L F   G + +       +        +Q+   +
Sbjct: 319 MGIPQLFLIPLVPQLMKVISPKVLCALGFCLFGAASFGSGVLNPDFAGPQFNHIQIIRAL 378

Query: 375 GVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYLS 434
           G  +  +    I  + +        S L   LR LGG+   +L   +   R   +  YL 
Sbjct: 379 GQPMIMVTISLIATAYIQQQDAGSASSLFNILRNLGGAIGIALLATLLDARTKVYFDYLR 438

Query: 435 EHISQFDPTTRHTLEQLG---GASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFA-GLI 490
           E +   +P     L QL    G    +  +L +I + QA +M+  D F  +    A  ++
Sbjct: 439 ESVVPSNPQVAERLAQLAERLGNDNAALGKLSEITHQQALIMAYNDAFHFVGIGLAVSMV 498

Query: 491 LLVWFAKPPFTAKAGPA 507
            ++   K P   KAG A
Sbjct: 499 AVLLTRKLPEGLKAGEA 515