Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Serratia liquefaciens MT49

 Score =  512 bits (1318), Expect = e-149
 Identities = 253/496 (51%), Positives = 348/496 (70%), Gaps = 4/496 (0%)

Query: 18  TIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRR 77
           T+ L+LATFMQVLD+TIANVA+PTI+GNLG S  QGTWVITSF V+NAI++P+TGWL++R
Sbjct: 15  TVALALATFMQVLDSTIANVAIPTIAGNLGSSNSQGTWVITSFGVANAISIPITGWLAKR 74

Query: 78  FGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAK 137
            GEV+LF+W+T LFVLAS+LCGI+ S+  L+ FRV+QGVVAGPL P++Q+LL+  YPPAK
Sbjct: 75  IGEVRLFLWSTALFVLASWLCGISNSLGMLIFFRVIQGVVAGPLIPLSQSLLLNNYPPAK 134

Query: 138 RGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVV 197
           R MALAL +M  +VAPI GPILGG+I+D+Y W WIFFIN+PIG     V    ++ R   
Sbjct: 135 RAMALALWSMTVIVAPIFGPILGGYISDNYHWGWIFFINIPIGAVVILVAMSTLKGRETK 194

Query: 198 TSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTD 257
           T  +P+D +GL+ LI+G+G+LQV+LD+G +LDWF S+ IIV ++++VV L   ++WELTD
Sbjct: 195 TEIKPIDTVGLVLLIVGIGSLQVMLDQGKELDWFNSTEIIVLTVVAVVALLFLIVWELTD 254

Query: 258 RHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGL 317
            HPVV+L LF  RNF +G + +   Y  +FG  ++LPQ LQ   GYTATWAGLA AP+GL
Sbjct: 255 DHPVVDLSLFKSRNFTVGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGL 314

Query: 318 LPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRA-GFTSEVDFQHVALVQLFMGIGV 376
           +PV++SP +GK+ +R D+R L   +F+      Y RA  F   +DF   A  Q   G  +
Sbjct: 315 IPVLLSPIIGKFGNRLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAI 374

Query: 377 ALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYLSEH 436
           A FFMP  +I LS LPP ++A  S L+ F RTL GS   S+TT +W +R  QHH+ L+E 
Sbjct: 375 ACFFMPLTTITLSGLPPERMAAASSLSNFTRTLAGSIGTSITTTLWTQRESQHHSQLTEF 434

Query: 437 ISQFDPTTR---HTLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGLILLV 493
           ++ ++P ++     LEQ+G +  Q+ A +   +  Q  ++S  + F L + VF  L++LV
Sbjct: 435 VNPYNPQSQEMYRQLEQIGMSKQQASAYIANEITAQGLIISANEIFWLSAGVFLVLLVLV 494

Query: 494 WFAKPPFTAKAGPASA 509
           W AKPPF++  G   A
Sbjct: 495 WVAKPPFSSGGGGGGA 510