Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 475 a.a., putative transport protein HsrA from Escherichia coli ECRC100

 Score =  171 bits (433), Expect = 5e-47
 Identities = 119/401 (29%), Positives = 197/401 (49%), Gaps = 11/401 (2%)

Query: 22  SLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEV 81
           ++A FMQ LD TI N ALP I+ +L  S       I S+ ++ A+ +P++GWL+ RFG  
Sbjct: 17  AMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLIPVSGWLADRFGTR 76

Query: 82  KLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGMA 141
           ++F  A  LF L S  C ++ S+P+LV FRV+QG+    + P+ +  L+  YP  +    
Sbjct: 77  RIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLALLRAYPRNELLPV 136

Query: 142 LALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVVTSRQ 201
           L  +AM  +V PI GPILGG +    +W WIF IN+PIG+      R+ M      T+R+
Sbjct: 137 LNFVAMPGLVGPILGPILGGVLVTWATWHWIFLINIPIGIAGLLYARKHMPN--FTTARR 194

Query: 202 PMDYIGLLTLIIGVGALQVVLDKGNDL--DWFESSFIIVGSLI-SVVFLAVFVIWELTDR 258
             D  G L      G   V+   G +L  +   +S+I +  ++ S+  L ++++      
Sbjct: 195 RFDITGFLLF----GLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLLLYILHARRTP 250

Query: 259 HPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGLL 318
           +P+++L LF  R F IG +  +    G   +  ++P  LQ   GY A  AG  +AP  L 
Sbjct: 251 NPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIAGCMMAPTALG 310

Query: 319 PVIMSPFVGKYAHRFDLR-VLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGIGVA 377
            +I    V +   R   R  L G+  + IG      +  +  +    + L    +G+ ++
Sbjct: 311 SIIAKSMVTQVLRRLGYRHTLVGITVI-IGLMIAQFSLQSPAMAIWMLILPLFILGMAMS 369

Query: 378 LFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLT 418
             F    +I L+DL     + G+ +    + L  S   +++
Sbjct: 370 TQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVS 410