Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 510 a.a., multidrug efflux MFS transporter permease subunit EmrB from Dickeya dianthicola ME23

 Score =  514 bits (1325), Expect = e-150
 Identities = 265/502 (52%), Positives = 347/502 (69%), Gaps = 8/502 (1%)

Query: 13  SLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTG 72
           +L L TI LSLATFMQVLD+TIANVA+PTI+GNLG S  QGTWVITSF V+NAI++P+TG
Sbjct: 10  TLALMTIALSLATFMQVLDSTIANVAIPTIAGNLGASNSQGTWVITSFGVANAISIPITG 69

Query: 73  WLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAV 132
           WL++RFGEV+LFIWAT+LF L S+LCG++ S+  L+  R+LQG+VAGP+ P++Q+LL+  
Sbjct: 70  WLAKRFGEVRLFIWATVLFTLTSWLCGMSTSLEMLIVSRMLQGLVAGPIIPLSQSLLLNN 129

Query: 133 YPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMR 192
           YPPAKRG+ALAL +M  VVAPI GPILGGWI+D+Y W WIFFINVP+GL    +  Q +R
Sbjct: 130 YPPAKRGIALALWSMTVVVAPIFGPILGGWISDNYHWGWIFFINVPLGLLVVLITLQTLR 189

Query: 193 TRPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVI 252
            R   T  +P+D IGL+ L  G+G LQ++LD+G +LDWF S+ I+  ++I+VV L V V+
Sbjct: 190 GRETKTEIRPIDTIGLILLAAGIGCLQMMLDRGKELDWFNSTEIVALAVIAVVSLTVLVV 249

Query: 253 WELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAV 312
           WELTD HPVV+L LF  RNF IG +     +  +FG  ++LPQ LQ   GYTATWAGLA 
Sbjct: 250 WELTDDHPVVDLSLFKMRNFTIGCLCTSLAFMLYFGAIVLLPQLLQVVFGYTATWAGLAS 309

Query: 313 APIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRA-GFTSEVDFQHVALVQLF 371
           AP+GL+PVI+SP +G++ H+ D+R L   +F+      Y RA  F   ++F   A  Q  
Sbjct: 310 APVGLMPVILSPLIGRFMHKLDMRRLVTFSFIMYAVCFYWRAYTFEPAMNFGASAWPQFV 369

Query: 372 MGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHA 431
            G  VA FFMP  +I LS LPP ++A  S L+ F RTL GS   S+TT +W RR   HHA
Sbjct: 370 QGFAVACFFMPLTTITLSGLPPERMAAASSLSNFARTLAGSIGTSVTTTLWERREALHHA 429

Query: 432 YLSEHISQFDPTTRHT---LEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAG 488
            LSE I+ ++P  + T   LE +G +  Q  + L Q +  Q  ++   + F L + VF  
Sbjct: 430 QLSEAINPYNPLAQQTYQQLEAMGMSQQQVSSYLAQQVTAQGLIIGANEIFWLSAGVFVV 489

Query: 489 LILLVWFAKPPFTAKAGPASAG 510
           LI+LVWFAKPPF    G  SAG
Sbjct: 490 LIVLVWFAKPPF----GGHSAG 507