Pairwise Alignments

Query, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 794 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  326 bits (835), Expect = 3e-93
 Identities = 175/355 (49%), Positives = 241/355 (67%), Gaps = 3/355 (0%)

Query: 293 RVQEQE-RLAKAEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQELMRQRLDQSRFD 351
           +VQE+   L KAEA LRQ+QKMEAVGQL+GG+AHDFNNLLG I G+ EL++++L+ +   
Sbjct: 433 KVQERTAELMKAEATLRQSQKMEAVGQLTGGLAHDFNNLLGAISGSLELLKRKLEDN--P 490

Query: 352 ALAPLLELSSSAAQRASSLVHRLLAFSRQQTLQPCSTQVATLVAGMEDLLRRTIGPAITL 411
            L+  +++  +A +RA++L HRLLAFSRQQTL+P   +V  LV G E+L+RR IGP + L
Sbjct: 491 GLSRYVDIGQTATKRAAALTHRLLAFSRQQTLEPKVVKVNQLVGGFEELVRRAIGPQVAL 550

Query: 412 SSRFASQLWPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLLLDDEQAVALELPA 471
                  +WP  +DP QLE+ALLNLCINARDAMP GG + I   N  LD+  A   ++  
Sbjct: 551 EVVAGIGIWPVHVDPGQLENALLNLCINARDAMPGGGRLVIETANRSLDELAASEHQMLP 610

Query: 472 SEFVRLSIVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGFVRQSGGQLRVLSV 531
            ++V +S+ DNGSGM  +V+ RA +PFFTTKP+G GTGLGLSM YGF RQSGG  R+ S 
Sbjct: 611 GQYVSISVSDNGSGMPVDVIARAFDPFFTTKPIGVGTGLGLSMVYGFARQSGGHARIYSE 670

Query: 532 PGEGTRIELLLPRHHEQAQAPISKPPRTLLQRSSEAAKRILLVEDQTALRLVIGEVLEEL 591
            G GT + + LPR+     A    P    + +S+   + +L+V+D+ ++R+++ E L +L
Sbjct: 671 VGTGTNVCMYLPRYEGGECAADDLPASNQVPQSTGVGEIVLVVDDEASVRMLMVETLVDL 730

Query: 592 GYRVDAFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRERYPDLKVL 646
           GYRV    +GP A+  LQ+     LL++DVGLP G+NGRQVA+  R   P L+VL
Sbjct: 731 GYRVLHAADGPQAVELLQANRSVALLVTDVGLPKGMNGRQVADAGRLINPSLRVL 785



 Score = 32.3 bits (72), Expect = 9e-05
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 139 RQVAVLFKDVTERRRAEQALQRLNEELEQRVNAALAE 175
           R+VA   +   ERRRAEQ L+ L E LE +V    AE
Sbjct: 404 REVAHRTRQAVERRRAEQELRALAESLECKVQERTAE 440