Pairwise Alignments
Query, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440
Subject, 905 a.a., hypothetical protein from Sphingobium sp. HT1-2
Score = 291 bits (746), Expect = 7e-83
Identities = 200/576 (34%), Positives = 302/576 (52%), Gaps = 66/576 (11%)
Query: 149 TERRRAEQALQRLNEELEQRVNAALAERRLFAELVDHSVVNVHVVDKDLRWLAVNRQARH 208
TE+ A++AL + EL + D V + VD D V R A
Sbjct: 202 TEKVEAQRALAKSESELRI--------------ITDSLPVLISYVDAD----HVYRFANS 243
Query: 209 DFHLLYGRTPE--IGDYLPGLFEDGTAGQTPILPMWQRALAGEQFIEIGTFG-KPPAVRH 265
+ G+ P IG ++ + + T LP+ +RA+AGE + T + R
Sbjct: 244 FYEDWVGKPPSEVIGRHVRDVVGEKT--YVARLPLIERAMAGEWVVADTTMPHRSGEDRA 301
Query: 266 YELRFNALRDPKGEVQGAFLFAYDISERVQEQERLAK----------------------- 302
E+R+ + G V G + +DI +RV+ + L +
Sbjct: 302 AEVRYIPRIEADGSVAGFHVLVFDIEDRVRREAALERQVQHRERAEEQLRHLNETLETRV 361
Query: 303 ---------AEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQELMRQRLDQSRFDAL 353
AEA L Q+QKME +GQL+GG+AHDFNNLL + G +L+ + D + +
Sbjct: 362 VEEMAERRQAEAILAQSQKMETIGQLTGGVAHDFNNLLQVVSGNLQLLAR--DIAGNEKA 419
Query: 354 APLLELSSSAAQRASSLVHRLLAFSRQQTLQPCSTQVATLVAGMEDLLRRTIGPAITLSS 413
+ + + R + L +LLAF R+Q L+P V V M+D+LRR IG I + +
Sbjct: 420 ETRVANAMAGVTRGAKLAAQLLAFGRRQALEPKVVNVTRFVRDMDDMLRRAIGEGIEVET 479
Query: 414 RFASQLWPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLLLDDEQAVA-LELPAS 472
LW TF+DP Q+E+ALLNL INARDAM G + I N LDDE A + E+
Sbjct: 480 IVGGGLWNTFVDPAQVENALLNLAINARDAMEGQGKLTIELGNASLDDEYARSHSEVAPG 539
Query: 473 EFVRLSIVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGFVRQSGGQLRVLSVP 532
++V L++ D GSG+ E++E+ +PFF+TK G+G+GLGLSM YGFV+QSGG +++ S
Sbjct: 540 QYVMLAVTDTGSGIPPEIIEKVFDPFFSTKSEGKGSGLGLSMVYGFVKQSGGHVKIYSEV 599
Query: 533 GEGTRIELLLPR--HHEQAQAPISKPPRTLLQRSSEAAKRILLVEDQTALRLVIGEVLEE 590
GEGT I+L PR +E + + P ++ SE +L+VED A+R + E+L +
Sbjct: 600 GEGTTIKLYFPRSVENEDLEVELDSGP---IRGGSET---VLVVEDDDAVRATVVEMLND 653
Query: 591 LGYRVDAFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRERYPDLKVLLITG 650
LGY V + SAL+ ++SG + D+L +DV +PG L ++A RER PD+ VL +G
Sbjct: 654 LGYGVLKAVDASSALSVIESGIQIDMLFTDVVMPGRLKSAELARMARERQPDIAVLFTSG 713
Query: 651 YDESAAFSDGQPLQGTLVLTKPFELEALAERVRELL 686
Y E++ G+ G +L+KP+ +ALA + R +L
Sbjct: 714 YTENSIVHGGRLDAGVELLSKPYSRDALARKFRHVL 749
Score = 48.5 bits (114), Expect = 1e-09
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 63 SDYVHVLANAAYAKHAGIP--NVVGQKLREMVPDE-------------ADDWVARYGAVL 107
+D+V+ AN+ Y G P V+G+ +R++V ++ A +WV +
Sbjct: 234 ADHVYRFANSFYEDWVGKPPSEVIGRHVRDVVGEKTYVARLPLIERAMAGEWVVADTTMP 293
Query: 108 -RTGEPLHFEQELI----ATGHVLS--VTTFRIEPAEKRQVAVLFKDVTERRRAEQALQR 160
R+GE E I A G V V F IE +R+ A L + V R RAE+ L+
Sbjct: 294 HRSGEDRAAEVRYIPRIEADGSVAGFHVLVFDIEDRVRREAA-LERQVQHRERAEEQLRH 352
Query: 161 LNEELEQRVNAALAERR 177
LNE LE RV +AERR
Sbjct: 353 LNETLETRVVEEMAERR 369
Score = 48.1 bits (113), Expect = 2e-09
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 542 LPRHHEQAQAPISKPPRTLLQRSSEAAKRILLVEDQTALRLVIGEVLEELGYRVDAFENG 601
L R AP KP R R++ A L+VED + E++++LG V +
Sbjct: 757 LARTMSARSAPDDKPER----RNALA----LIVEDDAIILANTAELVKDLGLTVIEALSA 808
Query: 602 PSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRERYPDLKVLLITG-----YDESAA 656
A++ LQ+ D+L++D LP G+ G +A R+ P + ++ TG YD SA
Sbjct: 809 EDAVSALQT-THVDVLITDANLP-GMTGPDLAAIARQMLPHIGIIFATGDTQLDYDRSA- 865
Query: 657 FSDGQPLQGTLVLTKPFELEALAERVREL 685
T++L KP++ +AL++ + E+
Sbjct: 866 -------PKTVLLAKPYDGKALSQAIAEV 887
Score = 33.1 bits (74), Expect = 6e-05
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 215 GRTPEIGDYLPGLFEDGTAGQTPILPMWQRALAGEQFIEIGTFGKPPAVRHYELRFNALR 274
G PEI D+ + G G+ +Q + + +G P V ++L + +
Sbjct: 135 GIWPEIWDFNRQILASGFGGEV--------VSHLDQPMILNRYGTPEEVI-FDLFYTPIY 185
Query: 275 DPKGEVQGAFLFAYDISERVQEQERLAKAEAALR 308
D G+V G + +E+V+ Q LAK+E+ LR
Sbjct: 186 DEDGKVGGVMCTVIENTEKVEAQRALAKSESELR 219