Pairwise Alignments

Query, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 782 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  240 bits (613), Expect = 2e-67
 Identities = 152/391 (38%), Positives = 225/391 (57%), Gaps = 15/391 (3%)

Query: 302 KAEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQELMRQRLDQSRFDALAPLLELSS 361
           + E ALR++QK+EAVGQL+GGIAHDFNNLLG I G  EL+++ L     +     L+ + 
Sbjct: 397 RTEEALRRSQKLEAVGQLTGGIAHDFNNLLGIITGNLELLQKNLAND--EKANRRLDTAL 454

Query: 362 SAAQRASSLVHRLLAFSRQQ--TLQPCSTQVATLVAGMEDLLRRTIGPAITLSSRFASQL 419
            +A+R + L  RLLAFSRQ    +      +   V GM D+L+R++   + + ++    L
Sbjct: 455 KSARRGADLTRRLLAFSRQAPTVVGNDPIDINDAVTGMLDMLQRSLTQIVQVKTKLDPAL 514

Query: 420 WPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLLLDDEQA-VALELPASEFVRLS 478
           W T ++  + E ALLNL INARDAMP GG + I   N++++ E A     L   E++ L 
Sbjct: 515 WKTVVNRSEFEDALLNLAINARDAMPDGGTLAIETSNIVVEAEHARFDPNLQPGEYIVLM 574

Query: 479 IVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGFVRQSGGQLRVLSVPGEGTRI 538
           + D+G+G+S ++V++  EPFFTTK  G+GTGLGLSM YGF R+SGG +RV S  G GT  
Sbjct: 575 VSDSGTGISKDIVDKIFEPFFTTKERGKGTGLGLSMVYGFARRSGGHVRVYSELGVGTAF 634

Query: 539 ELLLPRHHEQAQAPISKPPRTLLQRSS--EAAKRILLVEDQTALRLVIGEVLEELGYRVD 596
            L  PR H    A ++ P +   + S      + +L+++D+  L  + GE L +LGY   
Sbjct: 635 RLYFPRSH----AHVADPGQIGTETSDIPRGTETVLVIDDELHLAEIAGEFLSDLGYAPI 690

Query: 597 AFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRERYPDLKVLLITGYDESAA 656
              +   A+  L+     DL+ SDV +PGGL+G  +A+   +     KVLL +G+   A 
Sbjct: 691 ITTDTSEAVRLLKERSDIDLIFSDVVMPGGLDGFGLAKLATDL--GRKVLLTSGFTGYA- 747

Query: 657 FSDGQPLQGTLVLTKPFELEALAERVRELLE 687
               Q   G  V++KP+    LA  VR +L+
Sbjct: 748 -HQHQNDGGFSVISKPYSKADLARMVRTILD 777