Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  247 bits (630), Expect = 1e-69
 Identities = 190/553 (34%), Positives = 275/553 (49%), Gaps = 52/553 (9%)

Query: 15  RVAELEARLAAREDNVQAHD--------RLLGELLDNSVA------NVFAADRSMRLLAI 60
           R A L  RL A E N Q            LLG  +D   A       + A DRS  L AI
Sbjct: 154 RTALLAGRLGAFELNFQNWTLMTSATCRTLLGRAVDEPFAFDDLLQAIHADDRSNVLAAI 213

Query: 61  NRTARETFERYRGFVPQVGDYVPQFLTDQPD-----IMGRLAPIWPRILAGEAFIDTVTF 115
           +  AR             GD V +F     D     +  R   +  R  A    +  ++ 
Sbjct: 214 DGAARSG-----------GDLVEEFRVPWRDGSTHCVEIRARAVRDRSAANPRLVGVLSD 262

Query: 116 GLDDAPRHYEI-RYHPWLDAQQRIQGGYLFAYDITQRVTEQERLQQAEEALRQAQKMEAV 174
             D   R   + R +  L+ +   +   L A      + E E+ ++AEE LRQ QKME +
Sbjct: 263 VTDRKARQDALTRMNEILEERVAARTAELTASHAAV-LAEMEQRKRAEEQLRQVQKMETI 321

Query: 175 GQLTGGIAHDFNNLLASILGALELAGQRLVQQRLADTTQLLELSRHNAQRAAALVQRLLA 234
           GQLTG +AHDFNNLL +++G LEL  +R+     A   +L++ +   AQR AAL QRLLA
Sbjct: 322 GQLTGNVAHDFNNLLTAVIGNLELLRKRVANDPRA--VRLVDGACQGAQRGAALTQRLLA 379

Query: 235 FSRQQTLVPQRVDVQQLVAGMHDLISSSTGPYVDYHDQTHAGLWPIRIDAQQLENALLNL 294
           F+R+Q L  +   +  LV+G  DLI  S G  ++          P  +DA Q+E ALLNL
Sbjct: 380 FARRQDLKVEPRSLTDLVSGAVDLIERSIGSRIELRLHLSQDSPPALVDANQIELALLNL 439

Query: 295 CINARDAMPLGGTLSIGCANVEVQGAEARQLGLAAGRFLRIRVEDTGMGMSKAVMQRALE 354
            +NARDAMP GG +SI   + +     A   GL  G ++R+ V DTG GM    +++A E
Sbjct: 440 VVNARDAMPNGGVVSISVDHPQA----APGAGLPEGPYVRLTVSDTGYGMDAETLEKATE 495

Query: 355 PFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVIDSTLGQGTAINLYLPCDESIAAASPSPH 414
           PFF+TK  G+GTGLGLSMV+G   Q  G L + S +G GT   L+LP      A +P   
Sbjct: 496 PFFSTKEQGKGTGLGLSMVHGLAVQLNGALRLSSEVGAGTRAELWLP------ATTPLVG 549

Query: 415 VEGPAP-AASLQQRVCKVMLVEDEPALRLVMLEVLLDQGHEVQAFEDGRQAYKALQEAPA 473
            E  AP +   +     V++V+D+  +    +E+L D GH V     G  A + ++    
Sbjct: 550 EEKRAPISVGREMEELNVLVVDDDFLVAFSTVEMLRDLGHRVVESSSGEDALEIIRNDST 609

Query: 474 PDLLITDVGLPGGIDGYQLADACRGIAPHAAVLLITGY-DLAHSTAKARPHRRTELLAKP 532
            D+++TD  +P  ++G QLA A R + P   +LL +GY +L   + +  P      +AKP
Sbjct: 610 VDIMVTDFSMP-RMNGAQLASAARRLRPDLPILLASGYAELPSDSIRDLPR-----IAKP 663

Query: 533 FDLQALAQALERL 545
           +  + LA  + ++
Sbjct: 664 YQQEQLAAEIVKV 676