Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 794 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  299 bits (766), Expect = 2e-85
 Identities = 173/355 (48%), Positives = 226/355 (63%), Gaps = 7/355 (1%)

Query: 155 QER---LQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLVQQRLADT 211
           QER   L +AE  LRQ+QKMEAVGQLTGG+AHDFNNLL +I G+LEL  ++L        
Sbjct: 435 QERTAELMKAEATLRQSQKMEAVGQLTGGLAHDFNNLLGAISGSLELLKRKLEDN--PGL 492

Query: 212 TQLLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTGPYVDYHD 271
           ++ +++ +   +RAAAL  RLLAFSRQQTL P+ V V QLV G  +L+  + GP V    
Sbjct: 493 SRYVDIGQTATKRAAALTHRLLAFSRQQTLEPKVVKVNQLVGGFEELVRRAIGPQVALEV 552

Query: 272 QTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEARQLGLAAGR 331
               G+WP+ +D  QLENALLNLCINARDAMP GG L I  AN  +    A +  +  G+
Sbjct: 553 VAGIGIWPVHVDPGQLENALLNLCINARDAMPGGGRLVIETANRSLDELAASEHQMLPGQ 612

Query: 332 FLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVIDSTLG 391
           ++ I V D G GM   V+ RA +PFFTTKP+G GTGLGLSMVYGF RQSGG   I S +G
Sbjct: 613 YVSISVSDNGSGMPVDVIARAFDPFFTTKPIGVGTGLGLSMVYGFARQSGGHARIYSEVG 672

Query: 392 QGTAINLYLPCDESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLVMLEVLLDQ 451
            GT + +YLP  E    A+         P ++    +  V++V+DE ++R++M+E L+D 
Sbjct: 673 TGTNVCMYLPRYEGGECAADDLPASNQVPQSTGVGEI--VLVVDDEASVRMLMVETLVDL 730

Query: 452 GHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACRGIAPHAAVL 506
           G+ V    DG QA + LQ   +  LL+TDVGLP G++G Q+ADA R I P   VL
Sbjct: 731 GYRVLHAADGPQAVELLQANRSVALLVTDVGLPKGMNGRQVADAGRLINPSLRVL 785