Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 814 a.a., PAS domain S-box protein from Paraburkholderia sabiae LMG 24235

 Score =  251 bits (640), Expect = 1e-70
 Identities = 158/412 (38%), Positives = 223/412 (54%), Gaps = 21/412 (5%)

Query: 147 DITQRVTEQERLQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQR---- 202
           DIT+R    E L Q   AL Q+QKMEA+G+LTGG+AHDFNN+L  + G LEL G R    
Sbjct: 286 DITERRQAAELLDQTRNALFQSQKMEALGKLTGGVAHDFNNVLQVLRGNLELLGARHDDA 345

Query: 203 LVQQRLADTTQLLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSS 262
             + R+    + +E       R + L  +LLAF R+Q L P    +  ++  M DL+  +
Sbjct: 346 WSRSRIGRAIEAVE-------RGSKLASQLLAFGRRQALQPVPSSLGDVLHNMEDLLRRA 398

Query: 263 TGPYVDY--HDQTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGA 320
            G  V    H+     LW + +D  QLEN LLNL IN+RDAMP GG L+ G +N  +   
Sbjct: 399 LGERVRVRIHEARGGELWNVLVDTHQLENVLLNLAINSRDAMPEGGMLTFGLSNAVLDAQ 458

Query: 321 EARQLGLAAGRFLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQS 380
            A    +  G ++++ V DTG GMS  V +RA +PFFTTKP GQGTGLGLSM YGFV QS
Sbjct: 459 TAVTAQIDPGEYVKMTVTDTGTGMSADVAERAFDPFFTTKPEGQGTGLGLSMAYGFVLQS 518

Query: 381 GGQLVIDSTLGQGTAINLYLP--CDESIA-AASPSPHVEGPAPAASLQQRVCKVMLVEDE 437
           GG + + ST G GT + +YLP   D  +A AASP+    G             V++VED+
Sbjct: 519 GGHIELASTPGVGTTVTIYLPRSTDTPVARAASPAEPQTGDDLRGDE-----TVLVVEDD 573

Query: 438 PALRLVMLEVLLDQGHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACR 497
             ++L ++++L   G+ V    D  +A   L+     DLL +DV +PG +   ++A    
Sbjct: 574 RRVQLTVVDLLSQLGYGVLTANDATEALTVLRSGAKVDLLFSDVVMPGPLLSPEMARQAL 633

Query: 498 GIAPHAAVLLITGYDLAHSTAKARPHRRTELLAKPFDLQALAQALERLLGST 549
            + P   VL  +G+        A+  R  +LL KP+    LA+ +  +   T
Sbjct: 634 LMRPSLKVLFTSGHTRDTMGLDAQLRRGADLLQKPYSRMQLARKIREVFDGT 685



 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 428 VCKVMLVEDEPALRLVMLEVLLDQGHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGI 487
           V ++++VED+   R  + E+L   GH  +A  +  +A + LQ  P  D+L+TD+ LP G+
Sbjct: 700 VLQILIVEDDRDARDALCELLAMLGHTFEAVGNAEEALQRLQLHPF-DVLLTDLTLP-GM 757

Query: 488 DGYQLADACRGIAPHAAVLLITGYDLAHSTAKARPHRRTELLAKPFDLQALAQALE 543
            G+ LA A   +     V+  +G D A ++    P   T  L KP+ L  L  AL+
Sbjct: 758 SGFDLARAAIALRAAQRVVFSSGLD-AQTSDTTLPFEWT-ALRKPYSLDQLKAALD 811