Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 860 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  265 bits (678), Expect = 4e-75
 Identities = 167/400 (41%), Positives = 228/400 (57%), Gaps = 20/400 (5%)

Query: 152 VTEQERLQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLVQQRLADT 211
           +TEQ+   Q E ALR++QKMEAVGQLTGGIAHDFNNLL  I G LEL  +R VQ   +  
Sbjct: 470 ITEQK---QTEAALRRSQKMEAVGQLTGGIAHDFNNLLGIITGNLELL-ERTVQGSESGM 525

Query: 212 TQLLELSRHNAQRAAALVQRLLAFSRQQTLVP--QRVDVQQLVAGMHDLISSSTGPYVDY 269
            ++ + +  +A+R A L +RLL+FSRQ        R D+   ++GM +++  S    ++ 
Sbjct: 526 KRV-QTALRSARRGADLTRRLLSFSRQDPKAQGKSRTDIADAISGMQEMVQRSLTKVIEV 584

Query: 270 HDQTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEAR-QLGLA 328
             Q  A  W   I+  + E+ LLNLC+NARDAMP GG L++  +NVEV     R    L 
Sbjct: 585 RTQMAADTWHADINRSEFEDCLLNLCLNARDAMPQGGVLTVEASNVEVDDEMRRADPNLT 644

Query: 329 AGRFLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVIDS 388
            GR++ + V DTG G+ K ++ R  EPFFTTK  G+GTGLGL+M YGF R+SGG + + S
Sbjct: 645 PGRYVVVSVSDTGTGIPKEIVDRIFEPFFTTKERGKGTGLGLAMAYGFARRSGGHIRVYS 704

Query: 389 TLGQGTAINLYLP--CDESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLVMLE 446
             G GT   LYLP   D + AAA P P      P  S       V++V+DEP L  +  E
Sbjct: 705 EPGIGTTFRLYLPKAADGTEAAAEPLPE---ELPTGSEH-----VLVVDDEPHLAEIAGE 756

Query: 447 VLLDQGHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACRGIAPHAAVL 506
            L + G+      D  +A   LQ+    DLL TDV +P G+DGY L      +    AVL
Sbjct: 757 FLAELGYRATICADAAEALSILQQDGGVDLLFTDVVMPHGLDGYALERKAHEMGHACAVL 816

Query: 507 LITGYDLAHSTAKARPHRRTELLAKPFDLQALAQALERLL 546
           L +G+   H  A      ++E+L+KP+   +LA A+ R L
Sbjct: 817 LTSGF-TGHVAANGE-EPQSEILSKPYGKASLAHAVRRAL 854