Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 861 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  227 bits (578), Expect = 2e-63
 Identities = 163/449 (36%), Positives = 234/449 (52%), Gaps = 36/449 (8%)

Query: 119 DAPRHYEIRYHPWLDAQQRIQGGYLFAYDITQRVTEQERLQQAEEALRQAQKMEAVGQLT 178
           D  RH+    +  +D            Y I   VTEQ+ L   E  + Q QKM AVG L 
Sbjct: 424 DEGRHFRFYVNAVIDQDDEAPEEVAIVYAI--EVTEQKAL---ETQMAQTQKMNAVGTLA 478

Query: 179 GGIAHDFNNLLASILGALELAGQRLVQQRLADTT--QLLELSRHNAQRAAALVQRLLAFS 236
           GGIAHDFNN+L +IL + +     L+Q R AD +   L+E+ R NA RAA LV++LLAFS
Sbjct: 479 GGIAHDFNNVLTAILLSSD---HLLLQARPADPSFADLMEIKR-NANRAAVLVRQLLAFS 534

Query: 237 RQQTLVPQRVDVQQLVAGMHDLISSS-TGPYVDYHDQTHAGLWPIRIDAQQLENALLNLC 295
           R+QT+ P  +++  ++  +  L+    +G  V         LWP++ D  Q E  L+NLC
Sbjct: 535 RKQTMRPAVLNLTDVIGDLRMLVDRLISGTNVKLEVDYGRDLWPVKTDLSQFEQVLINLC 594

Query: 296 INARDAMPLGGTLSIGCANVEVQGAEARQLG---LAAGRFLRIRVEDTGMGMSKAVMQRA 352
           +NARDAMP GG ++I   NV+ +  E   LG     A   + + V D G G+   +M + 
Sbjct: 595 VNARDAMPDGGKITIRTRNVDEK--EIAALGRPEFPAEDMVMVEVADNGTGIPPEIMDKI 652

Query: 353 LEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVIDSTLGQGTAINLYLP----------- 401
            EPFFTTK +G+GTGLGLSMVYG V+QSGG +  +S +G+GTA  +YLP           
Sbjct: 653 FEPFFTTKEVGKGTGLGLSMVYGIVKQSGGYIYPESEVGKGTAFRIYLPRHVVEVVQVMG 712

Query: 402 -CDESIAA--ASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLVMLEVLLDQGHEVQAF 458
              E +AA   +  P  E P     L  +   V+LVEDE A+R     +L  +G+ V   
Sbjct: 713 QDGEMVAAPVVAAEPVKEEP---LDLTGKSAVVLLVEDEEAVRRGGKRMLETRGYTVHEA 769

Query: 459 EDGRQAYKALQEAPAP-DLLITDVGLPGGIDGYQLADACRGIAPHAAVLLITGYDLAHST 517
             G +A + ++E     D++++DV +P  +DG  L    R   P    + ++GY      
Sbjct: 770 GSGIEALEVMEELEGKVDIVVSDVVMP-EMDGPSLLRELRKSYPDLKFIFVSGYAEDAFA 828

Query: 518 AKARPHRRTELLAKPFDLQALAQALERLL 546
                  +   L KPF L+ LA A+  +L
Sbjct: 829 RNLPADAKFGFLPKPFSLKQLAIAVREML 857