Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 312 a.a., DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) from Escherichia coli BW25113

 Score =  130 bits (328), Expect = 3e-35
 Identities = 82/286 (28%), Positives = 151/286 (52%), Gaps = 5/286 (1%)

Query: 5   VKSNRALF--DLDLLRAIVVVADCGSFTTAAARLHSTQSTISQKVRRLEDMVGHRLLVRG 62
           + +NR +   DLDLLR  V VAD  +F  AAA +  TQS +SQ+++RLE +VG  L  R 
Sbjct: 2   ISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARH 61

Query: 63  NRDVLPTDAGQTLLGYARHMLALNDQMLEALAGAMVGTTVRLGVPEDFVGGRTTNALSAF 122
            R+ L T+ G  LLGYAR +L  ND+   +L  + +   + +G  ++         L+  
Sbjct: 62  GRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRV 121

Query: 123 SRLHPQVKLEVTSGLCRDLSQAYDNGELDLVLLKQRRNSREGVACWPERLQWIDSARTPA 182
           S ++P++ L+V       +++  ++ E+DL++   R ++ + +        W  +A    
Sbjct: 122 SSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYIL 181

Query: 183 FELDPIPLVTFPPRGLYREDMINAIEGMGRRWRISFTSSSLSGIQAAVADGMGISLLPPR 242
            + +PIPLV       +R+ ++  +      WR+++ +S+L  ++AAV  G+G++  P  
Sbjct: 182 QKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVE 241

Query: 243 AATGEHRVLGAGQGLPEVDSYEIVIVHRPTADVMVKALAEVMTQLL 288
             + + RVL    GLP +   E ++ + P+++     LA+V+ Q +
Sbjct: 242 MMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSN---NELAQVIYQAM 284