Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 319 a.a., Putative aliphatic sulfonates-binding protein from Xanthobacter sp. DMC5

 Score =  257 bits (657), Expect = 2e-73
 Identities = 135/303 (44%), Positives = 186/303 (61%), Gaps = 1/303 (0%)

Query: 19  LLASVASALLPWSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVKVSWHEFAA 78
           L + +A AL   +       + +RIGYQK+ ++ +LK  G LE  L P G  V W EF A
Sbjct: 13  LASGLAGALALGAAPARAQEKVVRIGYQKYGTLILLKNKGLLEPLLKPLGYSVKWAEFPA 72

Query: 79  GPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQDHLASVQ 138
           GPQLLEAL+ GA+D G+  +AP +FAQAAG P+VY+  E   P+G  ++V +   L +V 
Sbjct: 73  GPQLLEALNAGAVDFGNTGEAPPIFAQAAGAPLVYVGYEPAAPQGEAILVPKDSPLKTVA 132

Query: 139 DLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQSGSVQAVTLWD 198
           DLKGK VA  +G N  YLL  AL++AG+ Y DI  AY+   ADA AA + GSV A  +WD
Sbjct: 133 DLKGKTVALNKGSNVHYLLVKALEKAGVPYSDIKTAYL-TPADARAAFERGSVDAWAIWD 191

Query: 199 PFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAELGKVSQWANAKP 258
           PF AAAE     + L DG+G+ +N  FYLST SF DQ   ++      + +V  W  A P
Sbjct: 192 PFQAAAEKTIDARQLADGTGIVSNYQFYLSTRSFVDQAPQVVDVLLKGVAEVGAWVKANP 251

Query: 259 AEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQGLGLIPRKLQVA 318
              AA  +P +GI   +LEVA  R+ Y+   ITP++ A QQ++AD F  LGLIP+ +++A
Sbjct: 252 KAAAAEFSPLIGIPAPILEVALARQQYDVKPITPEVAAAQQQVADAFLALGLIPKPIRIA 311

Query: 319 EAV 321
           +A+
Sbjct: 312 DAL 314