Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 330 a.a., Putative aliphatic sulfonates-binding protein from Xanthobacter sp. DMC5

 Score =  112 bits (281), Expect = 1e-29
 Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 11/322 (3%)

Query: 8   FSPLRRLLIGGLLASVASALLPWSEAIADDAR---TLRIGYQKFNSINILKGSGALEKAL 64
           F+P RR ++   L + A+ L P++     D R   T+R+ +       I K  G  EK L
Sbjct: 5   FTPSRRQILAAGLGAAAAGLTPFAAQAQKDTRNTDTVRLTWGYSGLTLIAKERGVFEKTL 64

Query: 65  APQGVKVSW-HEFAAGPQLLEALSTGAIDLGHAADAPSVFAQA-AGKPVVYLAAEQPYPR 122
             +G+KV W   F      L+A++ G+ D G        FA   AG P+V+       PR
Sbjct: 65  GEKGIKVEWLGPFPNHAPTLQAVTGGSADYGFGGSTTPAFAAILAGSPLVFSQFILYEPR 124

Query: 123 GIGLVVREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADA 182
              ++ RE   +  V+DL GK VA  R    ++L   AL++ G+    +   Y+ N  DA
Sbjct: 125 TTAIIAREGSGIEKVEDLVGKSVAVNRSGLGEFLAVAALEKHGIDRSKVKFVYL-NPPDA 183

Query: 183 VAALQSGSVQAVTLWDPFLAAAESQPGLKNL-RDGSGLS--NNRTFYLSTASFADQHRAL 239
             AL SG V A ++W P +  A  +    ++  +G  L    +   Y+++  FA ++  +
Sbjct: 184 APALASGKVDAWSMWSPGVDIARLEYKAHDVFIEGRDLDFFIDYNSYVTSRKFAQENSQI 243

Query: 240 LKTFFAELGKVSQWANAKPAEVAALLAPQLGISTQVL-EVASERRNYNAVAITPQ-IVAE 297
           +K         ++W NA   E   ++  + G S  +  +  +  R Y A+ ++ Q  +A 
Sbjct: 244 VKAVAEAYEAETKWNNANIVEAETIVQTRAGYSPVIRDQFIARNRTYTAIPVSDQKFIAN 303

Query: 298 QQKLADTFQGLGLIPRKLQVAE 319
            QK AD      ++P  + V++
Sbjct: 304 LQKAADWLSARKILPEPIIVSD 325