Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

 Score =  123 bits (308), Expect = 7e-33
 Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 10/307 (3%)

Query: 12  RRLLIGGLLASVASALLPWSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVKV 71
           RR L+   L  +AS  L  + A A +  TL +G Q F++  +L+ SG L+        K+
Sbjct: 4   RRTLLS--LLGLASLALSGTSAGAAEPLTLTVGDQFFSNRIVLELSGELKDL----PYKI 57

Query: 72  SWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQ 131
            +  F  G  +  A+++GA+D+G   D P +   A G PV  +A+ Q    G+G+V R+ 
Sbjct: 58  DFKRFNTGSPVASAVASGALDVGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVARKG 117

Query: 132 DHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQSGSV 191
            H  SV DL+GK VA   G  +Q L   AL +AG+    +   Y+   A+A  AL  G +
Sbjct: 118 IH--SVADLRGKTVAIWNGSWSQQLAYKALDEAGVPRSSVNFKYLL-PAEASLALTQGDI 174

Query: 192 QAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAELGKVS 251
            A   W+P+++  E + G   +R+  GL +  T+ ++      Q  A++K F A L +  
Sbjct: 175 DAFGTWEPYVSLQEKE-GSTLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRAR 233

Query: 252 QWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQGLGLI 311
           QW+N    E A   +     + ++ +V  +R     + I+P I++E Q  AD      ++
Sbjct: 234 QWSNTHVDEYAEAWSKANQSAPEIAKVWFKRDAIKVLPISPTIISEAQATADFLVDAQML 293

Query: 312 PRKLQVA 318
            ++  VA
Sbjct: 294 KQRYDVA 300