Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 318 a.a., sulfonate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  104 bits (260), Expect = 3e-27
 Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 16/317 (5%)

Query: 10  PLRRLLIGGLLASVASALLPWSEAIADDARTLRIGYQKFNSIN-ILKGSGALEKALAPQG 68
           P  + L+G    ++A  L P + A   D   + + Y  ++ ++ +LK  G LE+AL    
Sbjct: 3   PFTQRLLGA--CALALCLQPLAHAAETDPAEVNLDYAYYSPVSLVLKHFGWLEQALPHS- 59

Query: 69  VKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPV----VYLAAEQPYPRGI 124
            KV W       + LE L++G +D   +A   +V ++A G P+    VY  AE       
Sbjct: 60  -KVGWVLSQGSNRSLEYLNSGGVDFASSASLSAVLSRANGSPIKSVYVYSRAEWT----- 113

Query: 125 GLVVREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVA 184
            LVVR+   L SV DLKGK++A  +G +       +LQ+AGL   D+   ++ +  D   
Sbjct: 114 ALVVRKDSPLKSVTDLKGKKIAATKGTDPYLFTLRSLQKAGLKKDDVELVHLQH-PDGRT 172

Query: 185 ALQSGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFF 244
           AL+ G V A    DP +AA+E Q G + L       N+      T  FA  H   +    
Sbjct: 173 ALEKGDVDAWAGLDPHMAASEIQAGSRLLYRNKDF-NSYGVVSVTEQFAKAHPQTITKVL 231

Query: 245 AELGKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADT 304
               K   WA   P E A LLA + G+  +V ++   R + +   +  + V   +  A  
Sbjct: 232 GAYEKARDWAVKHPDEFAKLLADESGLPLEVAKLQLSRTDLSTPFLNSKDVVSSKAAAPI 291

Query: 305 FQGLGLIPRKLQVAEAV 321
                L+ + + V + +
Sbjct: 292 LVSEELVRKGVNVDQVI 308