Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 326 a.a., Alkanesulfonates-binding protein from Variovorax sp. SCN45

 Score =  150 bits (379), Expect = 4e-41
 Identities = 105/310 (33%), Positives = 155/310 (50%), Gaps = 8/310 (2%)

Query: 9   SPLRRLLIGGLLASVASALLPWSEAIADDAR-TLRIGYQKFNSINILKGSGALEKALAPQ 67
           S  R+ L+ G  ASVA+A+      ++   R  L+ G QK   + +L+ +G LE      
Sbjct: 12  SSRRQFLVQG--ASVAAAIAAAPALVSAQGRPVLKAGDQKGGLLALLEAAGGLEGL---- 65

Query: 68  GVKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLV 127
           G  + W EF A   L EAL+  A+D G   DAP +FA AAG  V  + A +    G  ++
Sbjct: 66  GYDIQWSEFPAAAPLAEALNAAAVDSGPIGDAPLIFALAAGTRVKAIGANRSDSYGTAVL 125

Query: 128 VREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQ 187
           VR    L +  DL+GK VAT RG    Y+   A+  AGL  +D+   ++   ADA  AL 
Sbjct: 126 VRPDSPLKAAGDLRGKSVATNRGSIGHYVTLKAITAAGLKPEDVNIRFL-APADAKLALT 184

Query: 188 SGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAEL 247
            GSV A   W+P+ A AE     + L  G GL    ++  +T S     R +L+ F   +
Sbjct: 185 QGSVDAWATWEPYTALAEVSNHARVLVSGRGLLPGLSYLAATDSAIAAKRPVLQDFLQRV 244

Query: 248 GKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQG 307
            K   W+       +A LA  +GI  +  ++  ERR    VAI  Q++++QQ  AD ++ 
Sbjct: 245 VKAQLWSYRNVDAYSAALARIIGIPPEAAKLQFERRQQKWVAIDAQVISDQQGTADFYRQ 304

Query: 308 LGLIPRKLQV 317
           +GLI + L V
Sbjct: 305 VGLIKQPLDV 314